Information for 19-ACTCACTGRSTGG (Motif 28)

G T C A A G T C A C G T A G T C C G T A A G T C A C G T A C T G C T G A A T G C G C A T A C T G A C T G
Reverse Opposite:
G T A C A G T C C G T A A T C G A G C T A G T C C G T A C T A G A C G T A C T G C G T A A C T G A C G T
p-value:1e-6
log p-value:-1.450e+01
Information Content per bp:1.871
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif10.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.2 +/- 26.5bp
Average Position of motif in Background32.1 +/- 22.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-ACTCACTGRSTGG--
CAATCACTGGCAGAAT
 A C G T G T C A A G T C A C G T A G T C C G T A A G T C A C G T A C T G C T G A A T G C G C A T A C T G A C T G A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ACTCACTGRSTGG-
--TGAGTGACAGSC
 G T C A A G T C A C G T A G T C C G T A A G T C A C G T A C T G C T G A A T G C G C A T A C T G A C T G A C G T
A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ACTCACTGRSTGG
-BTGABTGACAGS
 G T C A A G T C A C G T A G T C C G T A A G T C A C G T A C T G C T G A A T G C G C A T A C T G A C T G
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:ACTCACTGRSTGG
-NTGATTGACAGN
 G T C A A G T C A C G T A G T C C G T A A G T C A C G T A C T G C T G A A T G C G C A T A C T G A C T G
A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:ACTCACTGRSTGG-
--TGATTGGCTANN
 G T C A A G T C A C G T A G T C C G T A A G T C A C G T A C T G C T G A A T G C G C A T A C T G A C T G A C G T
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFY(CCAAT)/Promoter/Homer

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:ACTCACTGRSTGG
-CCGATTGGCT--
 G T C A A G T C A C G T A G T C C G T A A G T C A C G T A C T G C T G A A T G C G C A T A C T G A C T G
A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:7
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:ACTCACTGRSTGG---
-CTGATTGGTCNATTT
 G T C A A G T C A C G T A G T C C G T A A G T C A C G T A C T G C T G A A T G C G C A T A C T G A C T G A C G T A C G T A C G T
A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

PB0149.1_Myb_2/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--ACTCACTGRSTGG-
CGACCAACTGCCATGC
 A C G T A C G T G T C A A G T C A C G T A G T C C G T A A G T C A C G T A C T G C T G A A T G C G C A T A C T G A C T G A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---ACTCACTGRSTGG
ACCACTCTCGGTCAC-
 A C G T A C G T A C G T G T C A A G T C A C G T A G T C C G T A A G T C A C G T A C T G C T G A A T G C G C A T A C T G A C T G
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C A C G T

Pax2/MA0067.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:ACTCACTGRSTGG
AGTCACGC-----
 G T C A A G T C A C G T A G T C C G T A A G T C A C G T A C T G C T G A A T G C G C A T A C T G A C T G
G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T