Information for 17-AATTDCSTCTGAA (Motif 23)

C G T A C G T A C G A T C G A T C T A G T G A C A T G C G C A T A T G C C G A T T C A G C G T A C G T A
Reverse Opposite:
A C G T C G A T A G T C C G T A A T C G C G T A T A C G A C T G G A T C C G T A G C T A A C G T A C G T
p-value:1e-8
log p-value:-1.892e+01
Information Content per bp:1.708
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif82.3
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets45.4 +/- 23.2bp
Average Position of motif in Background50.4 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0024.1_Dlx5/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AATTDCSTCTGAA
GGGGTAATTAGCTCTG--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T C G A T C T A G T G A C A T G C G C A T A T G C C G A T T C A G C G T A C G T A
A T C G A T C G T C A G T C A G G A C T G T C A C G T A G A C T C A G T C T G A T A C G A G T C A C G T T G A C A C G T A T C G A C G T A C G T

PH0009.1_Bsx/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----AATTDCSTCTGAA
CAGGTAATTACCTCAG--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T C G A T C T A G T G A C A T G C G C A T A T G C C G A T T C A G C G T A C G T A
T G A C T G C A C T A G C A T G G A C T T G C A G T C A A C G T A C G T C T G A A T G C G A T C A G C T T A G C C T G A C T A G A C G T A C G T

PH0021.1_Dlx2/Jaspar

Match Rank:3
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----AATTDCSTCTGAA
GGAATAATTACCTCAG--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T C G A T C T A G T G A C A T G C G C A T A T G C C G A T T C A G C G T A C G T A
T C A G T C A G C T A G C T G A G A C T C G T A C G T A C G A T A C G T C T G A A T G C G A C T G A C T G T A C C T G A A C T G A C G T A C G T

PH0103.1_Meox1/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----AATTDCSTCTGAA
GAGGTAATTACCTCAG--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T C G A T C T A G T G A C A T G C G C A T A T G C C G A T T C A G C G T A C G T A
T C A G T G C A C A T G C A T G G A C T T G C A G C T A C A G T A C G T C T G A A T G C G T A C G A C T A G T C C G T A C T A G A C G T A C G T

PH0020.1_Dlx1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AATTDCSTCTGAA
ATTAATTANCTCAN--
 A C G T A C G T A C G T C G T A C G T A C G A T C G A T C T A G T G A C A T G C G C A T A T G C C G A T T C A G C G T A C G T A
T C G A G A C T G A C T T C G A C G T A C G A T A C G T C T G A G A T C G A T C A C G T A G T C C T G A T A C G A C G T A C G T

Hoxd3/MA0912.1/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----AATTDCSTCTGAA
ANGNTAATTANCNCAN--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T C G A T C T A G T G A C A T G C G C A T A T G C C G A T T C A G C G T A C G T A
T C G A T A C G C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G C A G A T C G A C T G T A C C G T A C T G A A C G T A C G T

PH0079.1_Hoxd3/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----AATTDCSTCTGAA
ANGNTAATTANCNCAN--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T C G A T C T A G T G A C A T G C G C A T A T G C C G A T T C A G C G T A C G T A
T C G A T A C G C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G C A G A T C G A C T G T A C C G T A C T G A A C G T A C G T

PH0045.1_Hoxa1/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----AATTDCSTCTGAA
ACGGTAATTAGCTCAG--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T C G A T C T A G T G A C A T G C G C A T A T G C C G A T T C A G C G T A C G T A
T C G A T G A C C T A G A C T G A G C T G T C A C G T A A C G T A C G T C T G A T A C G A G T C G A C T G A T C C T G A C T A G A C G T A C G T

PH0133.1_Pax7/Jaspar

Match Rank:9
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------AATTDCSTCTGAA
NNNTNCTAATTAGNTCN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T C G A T C T A G T G A C A T G C G C A T A T G C C G A T T C A G C G T A C G T A
G A C T G T C A A C T G C G A T T G C A G A T C G A C T T C G A C G T A G C A T A G C T C T G A C T A G A C G T C G A T A T G C C A T G A C G T A C G T A C G T

PH0094.1_Lhx4/Jaspar

Match Rank:10
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------AATTDCSTCTGAA
TAAACTAATTAGCTTTG--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G A T C G A T C T A G T G A C A T G C G C A T A T G C C G A T T C A G C G T A C G T A
C A G T G T C A C G T A T C G A A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A T G C A C G T C G A T A C G T C T A G A C G T A C G T