Information for 7-TGCTTTAGTC (Motif 17)

C G A T A C T G G A T C A G C T A G C T C G A T C G T A C T A G C G A T T A G C
Reverse Opposite:
A T C G G C T A G A T C G C A T G C T A T C G A T C G A C T A G T G A C G C T A
p-value:1e-9
log p-value:-2.179e+01
Information Content per bp:1.565
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.32%
Number of Background Sequences with motif134.5
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets57.1 +/- 25.1bp
Average Position of motif in Background55.8 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGCTTTAGTC------
NTNNTTAAGTGGNTNAN
 A C G T C G A T A C T G G A T C A G C T A G C T C G A T C G T A C T A G C G A T T A G C A C G T A C G T A C G T A C G T A C G T A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

PH0004.1_Nkx3-2/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGCTTTAGTC------
NTNNTTAAGTGGTTANN
 A C G T C G A T A C T G G A T C A G C T A G C T C G A T C G T A C T A G C G A T T A G C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGCTTTAGTC--
--CTYRAGTGSY
 C G A T A C T G G A T C A G C T A G C T C G A T C G T A C T A G C G A T T A G C A C G T A C G T
A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Arid3a/MA0151.1/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:TGCTTTAGTC
---TTTAAT-
 C G A T A C T G G A T C A G C T A G C T C G A T C G T A C T A G C G A T T A G C
A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TGCTTTAGTC---
---TTRAGTGSYK
 C G A T A C T G G A T C A G C T A G C T C G A T C G T A C T A G C G A T T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

NKX2-8/MA0673.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TGCTTTAGTC-
--NTCAAGTGG
 C G A T A C T G G A T C A G C T A G C T C G A T C G T A C T A G C G A T T A G C A C G T
A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

Nkx3-1/MA0124.2/Jaspar

Match Rank:7
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TGCTTTAGTC--
---TTAAGTGGT
 C G A T A C T G G A T C A G C T A G C T C G A T C G T A C T A G C G A T T A G C A C G T A C G T
A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

DUXA/MA0884.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGCTTTAGTC--
NTGATTAAATTAN
 A C G T C G A T A C T G G A T C A G C T A G C T C G A T C G T A C T A G C G A T T A G C A C G T A C G T
G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G

NKX3-2/MA0122.2/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TGCTTTAGTC--
---TTAAGTGGN
 C G A T A C T G G A T C A G C T A G C T C G A T C G T A C T A G C G A T T A G C A C G T A C G T
A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TGCTTTAGTC---
---TTAAGTGCTT
 C G A T A C T G G A T C A G C T A G C T C G A T C G T A C T A G C G A T T A G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T