Information for 10-TSCACTTTTARKAGAA (Motif 14)

G A C T A T C G G A T C C G T A A G T C A G C T A C G T A C G T A C G T C G T A C T G A A C T G C G T A C A T G C G T A C G T A
Reverse Opposite:
A C G T C G A T G T A C A C G T G T A C A G C T A C G T C G T A C G T A C G T A C T G A A C T G C G A T C A T G A T G C C G T A
p-value:1e-9
log p-value:-2.245e+01
Information Content per bp:1.779
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 23.8bp
Average Position of motif in Background42.3 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0068.1_Hoxc13/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TSCACTTTTARKAGAA--
--NAATTTTACGAGNTNN
 G A C T A T C G G A T C C G T A A G T C A G C T A C G T A C G T A C G T C G T A C T G A A C T G C G T A C A T G C G T A C G T A A C G T A C G T
A C G T A C G T G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TSCACTTTTARKAGAA
-----TTTTATTRGN-
 G A C T A T C G G A T C C G T A A G T C A G C T A C G T A C G T A C G T C G T A C T G A A C T G C G T A C A T G C G T A C G T A
A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T

PB0129.1_Glis2_2/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TSCACTTTTARKAGAA--
----TCTTTANTAATANN
 G A C T A T C G G A T C C G T A A G T C A G C T A C G T A C G T A C G T C G T A C T G A A C T G C G T A C A T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:4
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TSCACTTTTARKAGAA
----NTTTTACGAGN-
 G A C T A T C G G A T C C G T A A G T C A G C T A C G T A C G T A C G T C G T A C T G A A C T G C G T A C A T G C G T A C G T A
A C G T A C G T A C G T A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T

PH0048.1_Hoxa13/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TSCACTTTTARKAGAA--
--ANATTTTACGAGNNNN
 G A C T A T C G G A T C C G T A A G T C A G C T A C G T A C G T A C G T C G T A C T G A A C T G C G T A C A T G C G T A C G T A A C G T A C G T
A C G T A C G T G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

Hoxa11/MA0911.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TSCACTTTTARKAGAA
---ANTTTTACGACC-
 G A C T A T C G G A T C C G T A A G T C A G C T A C G T A C G T A C G T C G T A C T G A A C T G C G T A C A T G C G T A C G T A
A C G T A C G T A C G T G C T A C G T A C G A T C G A T G C A T G C A T G C T A G A T C C T A G T C G A A G T C G A T C A C G T

HOXC10/MA0905.1/Jaspar

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TSCACTTTTARKAGAA
----NTTTTACGAC--
 G A C T A T C G G A T C C G T A A G T C A G C T A C G T A C G T A C G T C G T A C T G A A C T G C G T A C A T G C G T A C G T A
A C G T A C G T A C G T A C G T C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TSCACTTTTARKAGAA
--ANCGTTTANN----
 G A C T A T C G G A T C C G T A A G T C A G C T A C G T A C G T A C G T C G T A C T G A A C T G C G T A C A T G C G T A C G T A
A C G T A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T A C G T A C G T A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TSCACTTTTARKAGAA
----NTTTTACGAC--
 G A C T A T C G G A T C C G T A A G T C A G C T A C G T A C G T A C G T C G T A C T G A A C T G C G T A C A T G C G T A C G T A
A C G T A C G T A C G T A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:10
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TSCACTTTTARKAGAA
-----TTTTATKRGG-
 G A C T A T C G G A T C C G T A A G T C A G C T A C G T A C G T A C G T C G T A C T G A A C T G C G T A C A T G C G T A C G T A
A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T