Information for 4-GCGCCATCTT (Motif 9)

A C T G T A G C A C T G T G A C A G T C C T G A A G C T G A T C G C A T A C G T
Reverse Opposite:
T G C A C G T A C T A G T C G A G A C T T C A G A C T G T G A C A T C G T G A C
p-value:1e-11
log p-value:-2.621e+01
Information Content per bp:1.652
Number of Target Sequences with motif74.0
Percentage of Target Sequences with motif8.78%
Number of Background Sequences with motif1694.8
Percentage of Background Sequences with motif3.59%
Average Position of motif in Targets50.1 +/- 24.4bp
Average Position of motif in Background50.2 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-GCGCCATCTT-
GCNGCCATCTTG
 A C G T A C T G T A G C A C T G T G A C A G T C C T G A A G C T G A T C G C A T A C G T A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-GCGCCATCTT-
GCCGCCATCTTG
 A C G T A C T G T A G C A C T G T G A C A G T C C T G A A G C T G A T C G C A T A C G T A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GCGCCATCTT
GTCCGCCATTA-
 A C G T A C G T A C T G T A G C A C T G T G A C A G T C C T G A A G C T G A T C G C A T A C G T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T

E2F3/MA0469.2/Jaspar

Match Rank:4
Score:0.69
Offset:-7
Orientation:reverse strand
Alignment:-------GCGCCATCTT-
AAAAATGGCGCCATTTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A G C A C T G T G A C A G T C C T G A A G C T G A T C G C A T A C G T A C G T
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T

E2F2/MA0864.1/Jaspar

Match Rank:5
Score:0.69
Offset:-6
Orientation:reverse strand
Alignment:------GCGCCATCTT
AAAATGGCGCCATTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A G C A C T G T G A C A G T C C T G A A G C T G A T C G C A T A C G T
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GCGCCATCTT--
--GCCATCTGTT
 A C T G T A G C A C T G T G A C A G T C C T G A A G C T G A T C G C A T A C G T A C G T A C G T
A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0009.1_E2F3_1/Jaspar

Match Rank:7
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCCATCTT
ANCGCGCGCCCTTNN
 A C G T A C G T A C G T A C G T A C G T A C T G T A G C A C T G T G A C A G T C C T G A A G C T G A T C G C A T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0008.1_E2F2_1/Jaspar

Match Rank:8
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCCATCTT
NTCGCGCGCCTTNNN
 A C G T A C G T A C G T A C G T A C G T A C T G T A G C A C T G T G A C A G T C C T G A A G C T G A T C G C A T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCGCCATCTT-----
CCNNACCATCTGGCCTN
 A C G T A C G T A C T G T A G C A C T G T G A C A G T C C T G A A G C T G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------GCGCCATCTT-
CCTTCGGCGCCAAAAGG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A G C A C T G T G A C A G T C C T G A A G C T G A T C G C A T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G