Information for 2-CAGGCCAGCTGGCTRC (Motif 5)

A G T C C G T A A C T G C T A G A G T C G A T C C T G A A T C G A T G C A C G T A C T G T C A G T A G C G A C T C T G A A G T C
Reverse Opposite:
A C T G G A C T C G T A A T C G A G T C G T A C G T C A A T C G T A G C A G C T C T A G A C T G A G T C A G T C G A C T C T A G
p-value:1e-12
log p-value:-2.767e+01
Information Content per bp:1.725
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif11.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.3 +/- 19.6bp
Average Position of motif in Background52.6 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:1
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAGGCCAGCTGGCTRC
-VNAVCAGCTGGC---
 A G T C C G T A A C T G C T A G A G T C G A T C C T G A A T C G A T G C A C G T A C T G T C A G T A G C G A C T C T G A A G T C
A C G T T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CAGGCCAGCTGGCTRC
---GCCATCTGTT---
 A G T C C G T A A C T G C T A G A G T C G A T C C T G A A T C G A T G C A C G T A C T G T C A G T A G C G A C T C T G A A G T C
A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCCAGCTGGCTRC
CCNNACCATCTGGCCTN
 A C G T A G T C C G T A A C T G C T A G A G T C G A T C C T G A A T C G A T G C A C G T A C T G T C A G T A G C G A C T C T G A A G T C
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CAGGCCAGCTGGCTRC
CTGGCAGNCTGCCA--
 A G T C C G T A A C T G C T A G A G T C G A T C C T G A A T C G A T G C A C G T A C T G T C A G T A G C G A C T C T G A A G T C
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CAGGCCAGCTGGCTRC
----VCAGCTGBNN--
 A G T C C G T A A C T G C T A G A G T C G A T C C T G A A T C G A T G C A C G T A C T G T C A G T A G C G A C T C T G A A G T C
A C G T A C G T A C G T A C G T T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:6
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CAGGCCAGCTGGCTRC
----HCAGCTGDTN--
 A G T C C G T A A C T G C T A G A G T C G A T C C T G A A T C G A T G C A C G T A C T G T C A G T A G C G A C T C T G A A G T C
A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:7
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:CAGGCCAGCTGGCTRC
---NVCAGCTGBBNN-
 A G T C C G T A A C T G C T A G A G T C G A T C C T G A A T C G A T G C A C G T A C T G T C A G T A G C G A C T C T G A A G T C
A C G T A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:8
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CAGGCCAGCTGGCTRC
----CCAGCTGTTN--
 A G T C C G T A A C T G C T A G A G T C G A T C C T G A A T C G A T G C A C G T A C T G T C A G T A G C G A C T C T G A A G T C
A C G T A C G T A C G T A C G T T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCCAGCTGGCTRC
CTAGGCCT---------
 A C G T A G T C C G T A A C T G C T A G A G T C G A T C C T G A A T C G A T G C A C G T A C T G T C A G T A G C G A C T C T G A A G T C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CAGGCCAGCTGGCTRC
---RCCATMTGTT---
 A G T C C G T A A C T G C T A G A G T C G A T C C T G A A T C G A T G C A C G T A C T G T C A G T A G C G A C T C T G A A G T C
A C G T A C G T A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T A C G T A C G T