Information for 3-CCAGAAGGCA (Motif 4)

G A T C A G T C C G T A A C T G C T G A C T G A A T C G C T A G G T A C C G T A
Reverse Opposite:
A C G T C A T G A G T C A T G C A G C T A G C T A G T C A C G T A C T G C T A G
p-value:1e-12
log p-value:-2.780e+01
Information Content per bp:1.840
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.85%
Number of Background Sequences with motif201.5
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets53.7 +/- 25.8bp
Average Position of motif in Background48.7 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CCAGAAGGCA
ATGCCAGACN---
 A C G T A C G T A C G T G A T C A G T C C G T A A C T G C T G A C T G A A T C G C T A G G T A C C G T A
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCAGAAGGCA
AACAGATGGC-
 A C G T G A T C A G T C C G T A A C T G C T G A C T G A A T C G C T A G G T A C C G T A
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:3
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----CCAGAAGGCA
ATTTCCCAGVAKSCY
 A C G T A C G T A C G T A C G T A C G T G A T C A G T C C G T A A C T G C T G A C T G A A T C G C T A G G T A C C G T A
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CCAGAAGGCA---
AAGGCCAGATGGTCCGG
 A C G T A C G T A C G T A C G T G A T C A G T C C G T A A C T G C T G A C T G A A T C G C T A G G T A C C G T A A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CCAGAAGGCA-
TTGCCCTAGGGCAT
 A C G T A C G T A C G T G A T C A G T C C G T A A C T G C T G A C T G A A T C G C T A G G T A C C G T A A C G T
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CCAGAAGGCA--
CAAATCCAGACATCACA
 A C G T A C G T A C G T A C G T A C G T G A T C A G T C C G T A A C T G C T G A C T G A A T C G C T A G G T A C C G T A A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCAGAAGGCA
AACAKATGGY-
 A C G T G A T C A G T C C G T A A C T G C T G A C T G A A T C G C T A G G T A C C G T A
C T G A T G C A A G T C T C G A A C T G T G C A G C A T A C T G A C T G G A C T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCAGAAGGCA---
TACCCACAATGCATTG
 A C G T A C G T A C G T G A T C A G T C C G T A A C T G C T G A C T G A A T C G C T A G G T A C C G T A A C G T A C G T A C G T
A G C T C G T A G T A C G T A C A G T C C T G A A G T C T C G A C T G A C G A T T C A G A G T C G T C A G A C T G A C T C T A G

TFAP2B/MA0811.1/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCAGAAGGCA
TGCCCCAGGGCA
 A C G T A C G T G A T C A G T C C G T A A C T G C T G A C T G A A T C G C T A G G T A C C G T A
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCAGAAGGCA
TGCCCCAGGGCA
 A C G T A C G T G A T C A G T C C G T A A C T G C T G A C T G A A T C G C T A G G T A C C G T A
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A