Information for 1-AACACTAGGTGGC (Motif 3)

C G T A G T C A A G T C G T C A A G T C A G C T C G T A A C T G A C T G A C G T A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C C G T A A G T C A G T C A C G T C T G A A C T G A C G T A C T G A C G T C G A T
p-value:1e-15
log p-value:-3.675e+01
Information Content per bp:1.941
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.1 +/- 23.5bp
Average Position of motif in Background31.1 +/- 6.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--AACACTAGGTGGC-----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T C G T A G T C A A G T C G T C A A G T C A G C T C G T A A C T G A C T G A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AACACTAGGTGGC----
TGGCCACCAGGGGGCGCTA
 A C G T A C G T C G T A G T C A A G T C G T C A A G T C A G C T C G T A A C T G A C T G A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AACACTAGGTGGC-------
GCCASCAGGGGGCGCYVNNG
 C G T A G T C A A G T C G T C A A G T C A G C T C G T A A C T G A C T G A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Znf423/MA0116.1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AACACTAGGTGGC
GCACCCCTGGGTGCC
 A C G T A C G T C G T A G T C A A G T C G T C A A G T C A G C T C G T A A C T G A C T G A C G T A C T G A C T G A G T C
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C

SCRT1/MA0743.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AACACTAGGTGGC-
GAGCAACAGGTGGTT
 A C G T C G T A G T C A A G T C G T C A A G T C A G C T C G T A A C T G A C T G A C G T A C T G A C T G A G T C A C G T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.59
Offset:6
Orientation:forward strand
Alignment:AACACTAGGTGGC-
------AGGTGTCA
 C G T A G T C A A G T C G T C A A G T C A G C T C G T A A C T G A C T G A C G T A C T G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

SCRT2/MA0744.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AACACTAGGTGGC
ATGCAACAGGTGG-
 A C G T C G T A G T C A A G T C G T C A A G T C A G C T C G T A A C T G A C T G A C G T A C T G A C T G A G T C
T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AACACTAGGTGGC
---AACAGGTGNT
 C G T A G T C A A G T C G T C A A G T C A G C T C G T A A C T G A C T G A C G T A C T G A C T G A G T C
A C G T A C G T A C G T G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AACACTAGGTGGC
---NNCAGGTGNN
 C G T A G T C A A G T C G T C A A G T C A G C T C G T A A C T G A C T G A C G T A C T G A C T G A G T C
A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AACACTAGGTGGC
---AACAGATGGC
 C G T A G T C A A G T C G T C A A G T C A G C T C G T A A C T G A C T G A C G T A C T G A C T G A G T C
A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C