Information for 14-CAGGGGCCAGATT (Motif 24)

T G A C C T G A T C A G A T C G C A T G T C A G G A T C T G A C C G T A T A C G G T C A A C G T A G C T
Reverse Opposite:
T C G A T G C A C A G T A G T C G A C T A C T G C A T G A G T C G A T C A T G C A G T C A G C T A C T G
p-value:1e-7
log p-value:-1.704e+01
Information Content per bp:1.636
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif4.86%
Number of Background Sequences with motif870.9
Percentage of Background Sequences with motif1.84%
Average Position of motif in Targets43.1 +/- 26.2bp
Average Position of motif in Background50.4 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CAGGGGCCAGATT
TGTCAGGGGGCG----
 A C G T A C G T A C G T T G A C C T G A T C A G A T C G C A T G T C A G G A T C T G A C C G T A T A C G G T C A A C G T A G C T
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CAGGGGCCAGATT-
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T T G A C C T G A T C A G A T C G C A T G T C A G G A T C T G A C C G T A T A C G G T C A A C G T A G C T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAGGGGCCAGATT
-AGGTGHCAGACA
 T G A C C T G A T C A G A T C G C A T G T C A G G A T C T G A C C G T A T A C G G T C A A C G T A G C T
A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CAGGGGCCAGATT-
-AGGTGNCAGACAG
 T G A C C T G A T C A G A T C G C A T G T C A G G A T C T G A C C G T A T A C G G T C A A C G T A G C T A C G T
A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

PB0030.1_Hnf4a_1/Jaspar

Match Rank:5
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CAGGGGCCAGATT-
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T T G A C C T G A T C A G A T C G C A T G T C A G G A T C T G A C C G T A T A C G G T C A A C G T A G C T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CAGGGGCCAGATT
---ATGCCAGACN
 T G A C C T G A T C A G A T C G C A T G T C A G G A T C T G A C C G T A T A C G G T C A A C G T A G C T
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CAGGGGCCAGATT
CAAAGGTCAG---
 T G A C C T G A T C A G A T C G C A T G T C A G G A T C T G A C C G T A T A C G G T C A A C G T A G C T
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CAGGGGCCAGATT------
--AAGGCCAGATGGTCCGG
 T G A C C T G A T C A G A T C G C A T G T C A G G A T C T G A C C G T A T A C G G T C A A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CAGGGGCCAGATT-
BCNGGTTCTAGANCN
 A C G T T G A C C T G A T C A G A T C G C A T G T C A G G A T C T G A C C G T A T A C G G T C A A C G T A G C T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:10
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----CAGGGGCCAGATT
ATCCACAGGTGCGAAAA-
 A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C A G A T C G C A T G T C A G G A T C T G A C C G T A T A C G G T C A A C G T A G C T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A A C G T