Information for 9-CBTTCKGGCCAGA (Motif 18)

A T G C A T G C A C G T A G C T A G T C A C T G C A T G A C T G A T G C A G T C T C G A T C A G G T C A
Reverse Opposite:
A C G T A G T C A G C T A C T G A T C G T G A C G T A C T G A C C T A G T C G A T G C A T A C G T A C G
p-value:1e-8
log p-value:-2.035e+01
Information Content per bp:1.641
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.61%
Number of Background Sequences with motif245.4
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets53.9 +/- 25.3bp
Average Position of motif in Background50.9 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CBTTCKGGCCAGA--
-----ATGCCAGACN
 A T G C A T G C A C G T A G C T A G T C A C T G C A T G A C T G A T G C A G T C T C G A T C A G G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CBTTCKGGCCAGA
--TTCCCGCCWG-
 A T G C A T G C A C G T A G C T A G T C A C T G C A T G A C T G A T G C A G T C T C G A T C A G G T C A
A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G A C G T

E2F8/MA0865.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CBTTCKGGCCAGA
-TTTCCCGCCAAA
 A T G C A T G C A C G T A G C T A G T C A C T G C A T G A C T G A T G C A G T C T C G A T C A G G T C A
A C G T G A C T A G C T A C G T A G T C A G T C A T G C T A C G A G T C T A G C C T G A C G T A G C T A

E2F7/MA0758.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CBTTCKGGCCAGA-
TTTTCCCGCCAAAA
 A T G C A T G C A C G T A G C T A G T C A C T G C A T G A C T G A T G C A G T C T C G A T C A G G T C A A C G T
C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CBTTCKGGCCAGA
VDTTTCCCGCCA--
 A C G T A T G C A T G C A C G T A G C T A G T C A C T G C A T G A C T G A T G C A G T C T C G A T C A G G T C A
T A G C C G A T A C G T A G C T A G C T A G T C A T G C A G T C A C T G A T G C A T G C G C T A A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:CBTTCKGGCCAGA
------TGCCAA-
 A T G C A T G C A C G T A G C T A G T C A C T G C A T G A C T G A T G C A G T C T C G A T C A G G T C A
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

E2F4/MA0470.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CBTTCKGGCCAGA
NNTTCCCGCCC--
 A T G C A T G C A C G T A G C T A G T C A C T G C A T G A C T G A T G C A G T C T C G A T C A G G T C A
A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CBTTCKGGCCAGA
----CGTGCCAAG
 A T G C A T G C A C G T A G C T A G T C A C T G C A T G A C T G A T G C A G T C T C G A T C A G G T C A
A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CBTTCKGGCCAGA
-TTTCCCGCCMAV
 A T G C A T G C A C G T A G C T A G T C A C T G C A T G A C T G A T G C A G T C T C G A T C A G G T C A
A C G T C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:CBTTCKGGCCAGA---
--------CCAGACAG
 A T G C A T G C A C G T A G C T A G T C A C T G C A T G A C T G A T G C A G T C T C G A T C A G G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G