Information for 11-CAGGCCTGAG (Motif 35)

G A T C G T C A A T C G T C A G G T A C A G T C C G A T C T A G G C T A A T C G
Reverse Opposite:
T A G C C G A T G A T C C G T A C T A G C A T G A G T C A T G C A C G T C T A G
p-value:1e-5
log p-value:-1.273e+01
Information Content per bp:1.676
Number of Target Sequences with motif43.0
Percentage of Target Sequences with motif6.75%
Number of Background Sequences with motif1481.0
Percentage of Background Sequences with motif3.12%
Average Position of motif in Targets44.7 +/- 26.7bp
Average Position of motif in Background49.7 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCCTGAG
CNAGGCCT---
 A C G T G A T C G T C A A T C G T C A G G T A C A G T C C G A T C T A G G C T A A T C G
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCCTGAG
CTAGGCCT---
 A C G T G A T C G T C A A T C G T C A G G T A C A G T C C G A T C T A G G C T A A T C G
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:CAGGCCTGAG----
CAGGCCNNGGCCNN
 G A T C G T C A A T C G T C A G G T A C A G T C C G A T C T A G G C T A A T C G A C G T A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PB0180.1_Sp4_2/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CAGGCCTGAG
NNGGCCACGCCTTTN
 A C G T A C G T A C G T A C G T A C G T G A T C G T C A A T C G T C A G G T A C A G T C C G A T C T A G G C T A A T C G
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

TBX15/MA0803.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAGGCCTGAG
-AGGTGTGA-
 G A T C G T C A A T C G T C A G G T A C A G T C C G A T C T A G G C T A A T C G
A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T

TBX1/MA0805.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAGGCCTGAG
-AGGTGTGA-
 G A T C G T C A A T C G T C A G G T A C A G T C C G A T C T A G G C T A A T C G
A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CAGGCCTGAG
CACAGN------
 A C G T A C G T G A T C G T C A A T C G T C A G G T A C A G T C C G A T C T A G G C T A A T C G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CAGGCCTGAG
-AAGCTTG--
 G A T C G T C A A T C G T C A G G T A C A G T C C G A T C T A G G C T A A T C G
A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CAGGCCTGAG
NTCAAGGTCA---
 A C G T A C G T A C G T G A T C G T C A A T C G T C A G G T A C A G T C C G A T C T A G G C T A A T C G
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CAGGCCTGAG---
--NGCCTGAGGCN
 G A T C G T C A A T C G T C A G G T A C A G T C C G A T C T A G G C T A A T C G A C G T A C G T A C G T
A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G