Information for 14-GGGTNGTCTRGAC (Motif 23)

A C T G C T A G A T C G A C G T A C G T A C T G A C G T A T G C A C G T C T G A C T A G C G T A A G T C
Reverse Opposite:
C T A G A C G T A G T C A G C T C G T A A T C G C G T A A G T C C G T A C G T A A T G C A G T C G T A C
p-value:1e-9
log p-value:-2.087e+01
Information Content per bp:1.796
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.9 +/- 18.4bp
Average Position of motif in Background34.6 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.77
Offset:4
Orientation:reverse strand
Alignment:GGGTNGTCTRGAC-
----TGTCTAGACG
 A C T G C T A G A T C G A C G T A C G T A C T G A C G T A T G C A C G T C T G A C T A G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.70
Offset:3
Orientation:forward strand
Alignment:GGGTNGTCTRGAC
---TWGTCTGV--
 A C T G C T A G A T C G A C G T A C G T A C T G A C G T A T G C A C G T C T G A C T A G C G T A A G T C
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGGTNGTCTRGAC
-VBSYGTCTGG--
 A C T G C T A G A T C G A C G T A C G T A C T G A C G T A T G C A C G T C T G A C T A G C G T A A G T C
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGGTNGTCTRGAC---
NNTNNTGTCTGGNNTNG
 A C G T A C T G C T A G A T C G A C G T A C G T A C T G A C G T A T G C A C G T C T G A C T A G C G T A A G T C A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GGGTNGTCTRGAC
---CTGTCTGG--
 A C T G C T A G A T C G A C G T A C G T A C T G A C G T A T G C A C G T C T G A C T A G C G T A A G T C
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:6
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GGGTNGTCTRGAC
NNANTGGTGGTCTTNNN
 A C G T A C G T A C G T A C G T A C T G C T A G A T C G A C G T A C G T A C T G A C G T A T G C A C G T C T G A C T A G C G T A A G T C
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGGTNGTCTRGAC
CGTGGGTGGTCC----
 A C G T A C G T A C G T A C T G C T A G A T C G A C G T A C G T A C T G A C G T A T G C A C G T C T G A C T A G C G T A A G T C
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GGGTNGTCTRGAC-
----GGTCTGGCAT
 A C T G C T A G A T C G A C G T A C G T A C T G A C G T A T G C A C G T C T G A C T A G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGGTNGTCTRGAC---
CTAAGGTTCTAGATCAC
 A C G T A C T G C T A G A T C G A C G T A C G T A C T G A C G T A T G C A C G T C T G A C T A G C G T A A G T C A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

GLI2/MA0734.1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GGGTNGTCTRGAC
CAGTGTGGTCGC---
 A C G T A C G T A C T G C T A G A T C G A C G T A C G T A C T G A C G T A T G C A C G T C T G A C T A G C G T A A G T C
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C A C G T A C G T A C G T