Information for 12-CGGCTCCCTGCGC (Motif 20)

A G T C A C T G A C T G A G T C A C G T A G T C A G T C A G T C A C G T T A C G A G T C A C T G A T G C
Reverse Opposite:
A T C G A G T C A C T G A G T C C G T A A C T G A C T G A C T G C G T A A C T G A G T C A G T C C T A G
p-value:1e-9
log p-value:-2.292e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.0 +/- 23.3bp
Average Position of motif in Background67.2 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CGGCTCCCTGCGC
--GCTCCG-----
 A G T C A C T G A C T G A G T C A C G T A G T C A G T C A G T C A C G T T A C G A G T C A C T G A T G C
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGGCTCCCTGCGC
-GGCGCGCT----
 A G T C A C T G A C T G A G T C A C G T A G T C A G T C A G T C A C G T T A C G A G T C A C T G A T G C
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CGGCTCCCTGCGC---
--NNGCNCTGCGCGGC
 A G T C A C T G A C T G A G T C A C G T A G T C A G T C A G T C A C G T T A C G A G T C A C T G A T G C A C G T A C G T A C G T
A C G T A C G T T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CGGCTCCCTGCGC
CNGTCCTCCC-----
 A C G T A C G T A G T C A C T G A C T G A G T C A C G T A G T C A G T C A G T C A C G T T A C G A G T C A C T G A T G C
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CGGCTCCCTGCGC-
ACATGCTACCTAATAC
 A C G T A C G T A G T C A C T G A C T G A G T C A C G T A G T C A G T C A G T C A C G T T A C G A G T C A C T G A T G C A C G T
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CGGCTCCCTGCGC
-NGCTN-------
 A G T C A C T G A C T G A G T C A C G T A G T C A G T C A G T C A C G T T A C G A G T C A C T G A T G C
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CGGCTCCCTGCGC---
-GGCCYCCTGCTGDGH
 A G T C A C T G A C T G A G T C A C G T A G T C A G T C A G T C A C G T T A C G A G T C A C T G A T G C A C G T A C G T A C G T
A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0155.1_Osr2_2/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CGGCTCCCTGCGC-
ACTTGCTACCTACACC
 A C G T A C G T A G T C A C T G A C T G A G T C A C G T A G T C A G T C A G T C A C G T T A C G A G T C A C T G A T G C A C G T
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----CGGCTCCCTGCGC
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T A C G T A G T C A C T G A C T G A G T C A C G T A G T C A G T C A G T C A C G T T A C G A G T C A C T G A T G C
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CGGCTCCCTGCGC
-GGCTCYAKCAYC
 A G T C A C T G A C T G A G T C A C G T A G T C A G T C A G T C A C G T T A C G A G T C A C T G A T G C
A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C