Information for 8-CAAGGGATTACTTAHC (Motif 13)

G A T C C G T A C G T A A C T G C A T G A C T G C G T A A G C T C G A T G T C A A G T C A C G T A C G T T C G A G C A T A G T C
Reverse Opposite:
C T A G C G T A A G C T C G T A C G T A C T A G A C G T C G T A C T G A A C G T T G A C G T A C A G T C A C G T A C G T C T A G
p-value:1e-11
log p-value:-2.637e+01
Information Content per bp:1.764
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets72.8 +/- 17.0bp
Average Position of motif in Background76.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0125.1_Obox5_2/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CAAGGGATTACTTAHC
NANAGGGATTAATTATN
 A C G T G A T C C G T A C G T A A C T G C A T G A C T G C G T A A G C T C G A T G T C A A G T C A C G T A C G T T C G A G C A T A G T C
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

PH0138.1_Pitx2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAAGGGATTACTTAHC
TGAAGGGATTAATCATC
 A C G T G A T C C G T A C G T A A C T G C A T G A C T G C G T A A G C T C G A T G T C A A G T C A C G T A C G T T C G A G C A T A G T C
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PH0130.1_Otx2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAAGGGATTACTTAHC
TGTAGGGATTAATTGTC
 A C G T G A T C C G T A C G T A A C T G C A T G A C T G C G T A A G C T C G A T G T C A A G T C A C G T A C G T T C G A G C A T A G T C
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

PH0129.1_Otx1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAAGGGATTACTTAHC
AGAGGGGATTAATTTAT
 A C G T G A T C C G T A C G T A A C T G C A T G A C T G C G T A A G C T C G A T G T C A A G T C A C G T A C G T T C G A G C A T A G T C
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

PH0124.1_Obox5_1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAAGGGATTACTTAHC
TAGAGGGATTAAATTTC
 A C G T G A T C C G T A C G T A A C T G C A T G A C T G C G T A A G C T C G A T G T C A A G T C A C G T A C G T T C G A G C A T A G T C
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PH0099.1_Lhx9/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CAAGGGATTACTTAHC---
--NGTNATTAATTAATGNG
 G A T C C G T A C G T A A C T G C A T G A C T G C G T A A G C T C G A T G T C A A G T C A C G T A C G T T C G A G C A T A G T C A C G T A C G T A C G T
A C G T A C G T T C A G T A C G A C G T C T A G G C T A G A C T G A C T T G C A C T G A G A C T A C G T C T G A C T G A G A C T C T A G T A C G C T A G

PH0172.1_Tlx2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAAGGGATTACTTAHC--
-AANTTATTAATTAATTA
 G A T C C G T A C G T A A C T G C A T G A C T G C G T A A G C T C G A T G T C A A G T C A C G T A C G T T C G A G C A T A G T C A C G T A C G T
A C G T G C A T C G T A C T A G G A C T G C A T C G T A C G A T G A C T C G T A C G T A G C A T C G A T C T G A G C T A G A C T C G A T T G C A

Hoxd8/MA0910.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAAGGGATTACTTAHC--
-NAGCCATTAATTANTTA
 G A T C C G T A C G T A A C T G C A T G A C T G C G T A A G C T C G A T G T C A A G T C A C G T A C G T T C G A G C A T A G T C A C G T A C G T
A C G T C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

PH0080.1_Hoxd8/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAAGGGATTACTTAHC--
-NAGCCATTAATTANTTA
 G A T C C G T A C G T A A C T G C A T G A C T G C G T A A G C T C G A T G T C A A G T C A C G T A C G T T C G A G C A T A G T C A C G T A C G T
A C G T C G A T G C T A C T A G G A T C G A T C C T G A C G A T G C A T C G T A C G T A C G A T C A G T C T G A G C A T G A C T C G A T G T C A

PH0176.1_Vsx1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CAAGGGATTACTTAHC---
--ANTNATTAATTAACTNG
 G A T C C G T A C G T A A C T G C A T G A C T G C G T A A G C T C G A T G T C A A G T C A C G T A C G T T C G A G C A T A G T C A C G T A C G T A C G T
A C G T A C G T T C G A C G T A A C G T G A C T C T G A G A C T G A C T G T C A C G T A G A C T A C G T C T G A C T G A G A T C C A G T A T G C C A T G