Information for 1-CRTCACGTGA (Motif 1)

A T G C T C G A C A G T A G T C C G T A A T G C A C T G A C G T A C T G G T C A
Reverse Opposite:
C A G T A G T C C G T A A G T C A T C G A C G T A C T G G T C A A G C T T A C G
p-value:1e-17
log p-value:-4.094e+01
Information Content per bp:1.768
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.92%
Number of Background Sequences with motif164.0
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets55.8 +/- 24.6bp
Average Position of motif in Background46.5 +/- 35.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MLXIPL/MA0664.1/Jaspar

Match Rank:1
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:CRTCACGTGA-
-ATCACGTGAT
 A T G C T C G A C A G T A G T C C G T A A T G C A C T G A C G T A C T G G T C A A C G T
A C G T C T G A C G A T A G T C G T C A A G T C A T C G G C A T A T C G G T C A G A C T

BHLHE40/MA0464.2/Jaspar

Match Rank:2
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:CRTCACGTGA-
-GTCACGTGAN
 A T G C T C G A C A G T A G T C C G T A A T G C A C T G A C G T A C T G G T C A A C G T
A C G T C T A G C A G T T G A C C T G A A G T C C T A G A C G T C A T G G T C A A C G T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:CRTCACGTGA
NGKCACGTGM
 A T G C T C G A C A G T A G T C C G T A A T G C A C T G A C G T A C T G G T C A
T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C

BHLHE41/MA0636.1/Jaspar

Match Rank:4
Score:0.95
Offset:1
Orientation:forward strand
Alignment:CRTCACGTGA-
-GTCACGTGAC
 A T G C T C G A C A G T A G T C C G T A A T G C A C T G A C G T A C T G G T C A A C G T
A C G T T C A G C A G T T A G C T C G A A G T C T C A G C G A T T A C G G T C A A G T C

Arntl/MA0603.1/Jaspar

Match Rank:5
Score:0.95
Offset:2
Orientation:reverse strand
Alignment:CRTCACGTGA--
--NCACGTGACN
 A T G C T C G A C A G T A G T C C G T A A T G C A C T G A C G T A C T G G T C A A C G T A C G T
A C G T A C G T C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C

TFE3/MA0831.1/Jaspar

Match Rank:6
Score:0.95
Offset:1
Orientation:forward strand
Alignment:CRTCACGTGA-
-ATCACGTGAC
 A T G C T C G A C A G T A G T C C G T A A T G C A C T G A C G T A C T G G T C A A C G T
A C G T T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.95
Offset:0
Orientation:forward strand
Alignment:CRTCACGTGA
GGTCACGTGA
 A T G C T C G A C A G T A G T C C G T A A T G C A C T G A C G T A C T G G T C A
T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A

MLX/MA0663.1/Jaspar

Match Rank:8
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:CRTCACGTGA-
-ATCACGTGAT
 A T G C T C G A C A G T A G T C C G T A A T G C A C T G A C G T A C T G G T C A A C G T
A C G T C T G A G A C T G T A C C G T A G A T C A C T G A G C T C T A G T G C A G A C T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.94
Offset:1
Orientation:forward strand
Alignment:CRTCACGTGA
-GHCACGTG-
 A T G C T C G A C A G T A G T C C G T A A T G C A C T G A C G T A C T G G T C A
A C G T C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G A C G T

TFEB/MA0692.1/Jaspar

Match Rank:10
Score:0.94
Offset:1
Orientation:forward strand
Alignment:CRTCACGTGA-
-ATCACGTGAC
 A T G C T C G A C A G T A G T C C G T A A T G C A C T G A C G T A C T G G T C A A C G T
A C G T T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C