Information for 4-GTTTYRKTATTCA (Motif 6)

A C T G A C G T A C G T C G A T G A C T C T G A A C G T A C G T C G T A A C G T A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A C G T A A C G T C G T A G T C A G A C T C T G A C G T A C G T A C G T A A G T C
p-value:1e-11
log p-value:-2.594e+01
Information Content per bp:1.894
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.9 +/- 25.1bp
Average Position of motif in Background38.4 +/- 14.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0033.1_Irf3_1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GTTTYRKTATTCA
CAGTTTCGNTTCTN-
 A C G T A C G T A C T G A C G T A C G T C G A T G A C T C T G A A C G T A C G T C G T A A C G T A C G T A G T C C G T A
A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GTTTYRKTATTCA-
CATTAATTATTCAT
 A C T G A C G T A C G T C G A T G A C T C T G A A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C G T
G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T

PB0034.1_Irf4_1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----GTTTYRKTATTCA
TNTGGTTTCGATACN--
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T C G A T G A C T C T G A A C G T A C G T C G T A A C G T A C G T A G T C C G T A
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G A C G T A C G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:GTTTYRKTATTCA-
----GAATATTCAT
 A C T G A C G T A C G T C G A T G A C T C T G A A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C G T
A C G T A C G T A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTTTYRKTATTCA-
--TGAATTATGCAT
 A C T G A C G T A C G T C G A T G A C T C T G A A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C G T
A C G T A C G T C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

PB0035.1_Irf5_1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GTTTYRKTATTCA
NTGGTTTCGGTTNNN-
 A C G T A C G T A C G T A C T G A C G T A C G T C G A T G A C T C T G A A C G T A C G T C G T A A C G T A C G T A G T C C G T A
A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GTTTYRKTATTCA
TCAGTTTCATTTTCC-
 A C G T A C G T A C G T A C T G A C G T A C G T C G A T G A C T C T G A A C G T A C G T C G T A A C G T A C G T A G T C C G T A
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GTTTYRKTATTCA------
--TNNATTATGCATANNTT
 A C T G A C G T A C G T C G A T G A C T C T G A A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

POU4F3/MA0791.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTTTYRKTATTCA-
CTCATTAATTATGCAT
 A C G T A C G T A C T G A C G T A C G T C G A T G A C T C T G A A C G T A C G T C G T A A C G T A C G T A G T C C G T A A C G T
A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTTTYRKTATTCA
AGTTTCAKTTTC--
 A C G T A C T G A C G T A C G T C G A T G A C T C T G A A C G T A C G T C G T A A C G T A C G T A G T C C G T A
C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C A C G T A C G T