Information for 14-CCAGGCCATCTCA (Motif 23)

A G T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A G C T A G T C A C G T T A G C C T G A
Reverse Opposite:
A G C T A C T G C G T A A C T G C T G A A C G T A C T G A C T G A G T C A G T C A C G T A C T G A C T G
p-value:1e-6
log p-value:-1.506e+01
Information Content per bp:1.935
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.5 +/- 24.2bp
Average Position of motif in Background75.0 +/- 9.7bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CCAGGCCATCTCA
CTAGGCCT-----
 A G T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A G C T A G T C A C G T T A G C C T G A
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCAGGCCATCTCA----
CCNNACCATCTGGCCTN
 A G T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A G C T A G T C A C G T T A G C C T G A A C G T A C G T A C G T A C G T
A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCAGGCCATCTCA
CNAGGCCT-----
 A G T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A G C T A G T C A C G T T A G C C T G A
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCAGGCCATCTCA
CAAGGHCANV---
 A G T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A G C T A G T C A C G T T A G C C T G A
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCAGGCCATCTCA
NTCAAGGTCA-----
 A C G T A C G T A G T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A G C T A G T C A C G T T A G C C T G A
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CCAGGCCATCTCA
AAGTTCAAGGTCAGC---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A G C T A G T C A C G T T A G C C T G A
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCAGGCCATCTCA
BTCAAGGTCA-----
 A C G T A C G T A G T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A G C T A G T C A C G T T A G C C T G A
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CCAGGCCATCTCA-
----GCCATCTGTT
 A G T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A G C T A G T C A C G T T A G C C T G A A C G T
A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCAGGCCATCTCA
TRAGGTCA-----
 A G T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A G C T A G T C A C G T T A G C C T G A
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CCAGGCCATCTCA
TAAGCCACGCCCCCTTT
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C T G A G T C A G T C C G T A A G C T A G T C A C G T T A G C C T G A
A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T