Information for 4-GAACTGTAGT (Motif 20)

A C T G G T C A G T C A G A T C C G A T C T A G A C G T C G T A C A T G C G A T
Reverse Opposite:
G C T A G T A C G C A T T G C A G A T C G C T A C T A G C A G T C A G T T G A C
p-value:1e-7
log p-value:-1.800e+01
Information Content per bp:1.665
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif5.72%
Number of Background Sequences with motif918.2
Percentage of Background Sequences with motif1.86%
Average Position of motif in Targets43.1 +/- 25.8bp
Average Position of motif in Background50.3 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.78
Offset:-2
Orientation:reverse strand
Alignment:--GAACTGTAGT
GGGAATTGTAGT
 A C G T A C G T A C T G G T C A G T C A G A T C C G A T C T A G A C G T C G T A C A T G C G A T
C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:2
Score:0.68
Offset:-9
Orientation:reverse strand
Alignment:---------GAACTGTAGT-
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A G T C A G A T C C G A T C T A G A C G T C G T A C A T G C G A T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:3
Score:0.67
Offset:-9
Orientation:reverse strand
Alignment:---------GAACTGTAGT-
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T C A G T C A G A T C C G A T C T A G A C G T C G T A C A T G C G A T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GAACTGTAGT---
---CTGTGGTTTN
 A C T G G T C A G T C A G A T C C G A T C T A G A C G T C G T A C A T G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GAACTGTAGT---
-NNHTGTGGTTWN
 A C T G G T C A G T C A G A T C C G A T C T A G A C G T C G T A C A T G C G A T A C G T A C G T A C G T
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GAACTGTAGT--
--GCTGTGGTTT
 A C T G G T C A G T C A G A T C C G A T C T A G A C G T C G T A C A T G C G A T A C G T A C G T
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

PB0050.1_Osr1_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAACTGTAGT----
ATTTACAGTAGCAAAA
 A C G T A C G T A C T G G T C A G T C A G A T C C G A T C T A G A C G T C G T A C A T G C G A T A C G T A C G T A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PB0051.1_Osr2_1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAACTGTAGT----
ATGTACAGTAGCAAAG
 A C G T A C G T A C T G G T C A G T C A G A T C C G A T C T A G A C G T C G T A C A T G C G A T A C G T A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GAACTGTAGT------
NNNANTGCAGTGCNNTT
 A C G T A C T G G T C A G T C A G A T C C G A T C T A G A C G T C G T A C A T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GAACTGTAGT-----
TGACCTNTAGTAACCC
 A C G T A C T G G T C A G T C A G A T C C G A T C T A G A C G T C G T A C A T G C G A T A C G T A C G T A C G T A C G T A C G T
G A C T C T A G T G C A G T A C G A T C A G C T T A C G C A G T C T G A C T A G G C A T C T G A C T G A G T A C G T A C G A T C