Information for 1-GRCATTTGGCATC (Motif 2)

A C T G T C A G A G T C C G T A A C G T A C G T A C G T A C T G A C T G A T G C C G T A A C G T A T G C
Reverse Opposite:
A T C G G T C A A C G T A T C G A G T C A G T C C G T A C G T A C G T A A C G T A C T G A G C T A G T C
p-value:1e-12
log p-value:-2.898e+01
Information Content per bp:1.872
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.2 +/- 20.9bp
Average Position of motif in Background64.5 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:GRCATTTGGCATC
---NNTTGGCANN
 A C T G T C A G A G T C C G T A A C G T A C G T A C G T A C T G A C T G A T G C C G T A A C G T A T G C
A C G T A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

PB0150.1_Mybl1_2/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GRCATTTGGCATC
CACGGCAGTTGGTNN-
 A C G T A C G T A C G T A C T G T C A G A G T C C G T A A C G T A C G T A C G T A C T G A C T G A T G C C G T A A C G T A T G C
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GRCATTTGGCATC
-ACATATGG----
 A C T G T C A G A G T C C G T A A C G T A C G T A C G T A C T G A C T G A T G C C G T A A C G T A T G C
A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.65
Offset:5
Orientation:forward strand
Alignment:GRCATTTGGCATC
-----TTGGCA--
 A C T G T C A G A G T C C G T A A C G T A C G T A C G T A C T G A C T G A T G C C G T A A C G T A T G C
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GRCATTTGGCATC
----NTTGGCANN
 A C T G T C A G A G T C C G T A A C G T A C G T A C G T A C T G A C T G A T G C C G T A A C G T A T G C
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GRCATTTGGCATC
TGGCAGTTGG----
 A C G T A C T G T C A G A G T C C G T A A C G T A C G T A C G T A C T G A C T G A T G C C G T A A C G T A T G C
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T A C G T

NEUROD2/MA0668.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GRCATTTGGCATC
ACCATATGGC---
 A C T G T C A G A G T C C G T A A C G T A C G T A C G T A C T G A C T G A T G C C G T A A C G T A T G C
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GRCATTTGGCATC
NNNTGGCAGTTGGTNN-
 A C G T A C G T A C G T A C G T A C T G T C A G A G T C C G T A A C G T A C G T A C G T A C T G A C T G A T G C C G T A A C G T A T G C
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G A C G T

Twist2/MA0633.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GRCATTTGGCATC
NACATATGGN---
 A C T G T C A G A G T C C G T A A C G T A C G T A C G T A C T G A C T G A T G C C G T A A C G T A T G C
G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T A C G T A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GRCATTTGGCATC
GACATATGTT---
 A C T G T C A G A G T C C G T A A C G T A C G T A C G T A C T G A C T G A T G C C G T A A C G T A T G C
C T A G T C G A A G T C C G T A A C G T T G C A A G C T C T A G A C G T A G C T A C G T A C G T A C G T