Information for 4-ACAAATSWACAAAGGA (Motif 11)

C G T A G T A C G T C A C T G A C G T A C A G T T A G C G C A T C G T A A G T C T C G A C T G A C T G A C T A G C T A G C G T A
Reverse Opposite:
C G A T A G T C A G T C A G C T A G C T A G C T A C T G C G A T C G T A A T C G G C T A A C G T A G C T A C G T A C T G C G A T
p-value:1e-9
log p-value:-2.167e+01
Information Content per bp:1.733
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif13.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets46.9 +/- 22.6bp
Average Position of motif in Background40.9 +/- 17.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0061.1_Sox11_1/Jaspar

Match Rank:1
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ACAAATSWACAAAGGA---
--ATAAGAACAAAGGACTA
 C G T A G T A C G T C A C T G A C G T A C A G T T A G C G C A T C G T A A G T C T C G A C T G A C T G A C T A G C T A G C G T A A C G T A C G T A C G T
A C G T A C G T G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:ACAAATSWACAAAGGA---
--AGAAGAACAAAGGACTA
 C G T A G T A C G T C A C T G A C G T A C A G T T A G C G C A T C G T A A G T C T C G A C T G A C T G A C T A G C T A G C G T A A C G T A C G T A C G T
A C G T A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ACAAATSWACAAAGGA--
--AAACAGACAAAGGAAT
 C G T A G T A C G T C A C T G A C G T A C A G T T A G C G C A T C G T A A G T C T C G A C T G A C T G A C T A G C T A G C G T A A C G T A C G T
A C G T A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:ACAAATSWACAAAGGA
-------AACAAAGG-
 C G T A G T A C G T C A C T G A C G T A C A G T T A G C G C A T C G T A A G T C T C G A C T G A C T G A C T A G C T A G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:ACAAATSWACAAAGGA
-----GGAACAAAGR-
 C G T A G T A C G T C A C T G A C G T A C A G T T A G C G C A T C G T A A G T C T C G A C T G A C T G A C T A G C T A G C G T A
A C G T A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:ACAAATSWACAAAGGA----
--------ACAAAGGNBCCT
 C G T A G T A C G T C A C T G A C G T A C A G T T A G C G C A T C G T A A G T C T C G A C T G A C T G A C T A G C T A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:ACAAATSWACAAAGGA
-----VRRACAAWGG-
 C G T A G T A C G T C A C T G A C G T A C A G T T A G C G C A T C G T A A G T C T C G A C T G A C T G A C T A G C T A G C G T A
A C G T A C G T A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:ACAAATSWACAAAGGA
-------RACAAWGG-
 C G T A G T A C G T C A C T G A C G T A C A G T T A G C G C A T C G T A A G T C T C G A C T G A C T G A C T A G C T A G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:ACAAATSWACAAAGGA
--------ACAAAG--
 C G T A G T A C G T C A C T G A C G T A C A G T T A G C G C A T C G T A A G T C T C G A C T G A C T G A C T A G C T A G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:ACAAATSWACAAAGGA
-----AAAACAAAGG-
 C G T A G T A C G T C A C T G A C G T A C A G T T A G C G C A T C G T A A G T C T C G A C T G A C T G A C T A G C T A G C G T A
A C G T A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T