Information for 7-GMATWKAMTTAGT (Motif 10)

A C T G G T A C C G T A A C G T G C A T A C G T C G T A G T C A A C G T A C G T C G T A C T A G A C G T
Reverse Opposite:
C G T A A G T C A C G T G T C A C G T A A C G T A C G T G T C A C G T A C G T A A C G T A C T G A G T C
p-value:1e-9
log p-value:-2.243e+01
Information Content per bp:1.872
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.3 +/- 19.5bp
Average Position of motif in Background43.7 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0154.1_Prrx1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GMATWKAMTTAGT---
ANNAGTTAATTAGTTAN
 A C G T A C T G G T A C C G T A A C G T G C A T A C G T C G T A G T C A A C G T A C G T C G T A C T A G A C G T A C G T A C G T A C G T
T C G A A T C G G A C T G T C A T C A G A G C T G A C T C T G A C T G A A G C T A C G T C T G A C T A G A G C T C A G T T G C A A T G C

PH0147.1_Pou3f2/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GMATWKAMTTAGT---
GATAATTAATTAGTTTG
 A C G T A C T G G T A C C G T A A C G T G C A T A C G T C G T A G T C A A C G T A C G T C G T A C T A G A C G T A C G T A C G T A C G T
T A C G C G A T C G A T C G T A G C T A G A C T A G C T G C T A C G T A C G A T A C G T G C T A C T A G A C G T C A G T G A C T C T A G

mix-a/MA0621.1/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GMATWKAMTTAGT
--AATTAATTAGT
 A C T G G T A C C G T A A C G T G C A T A C G T C G T A G T C A A C G T A C G T C G T A C T A G A C G T
A C G T A C G T C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T

PH0095.1_Lhx5/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GMATWKAMTTAGT---
ANNATTTAATTAATTNN
 A C G T A C T G G T A C C G T A A C G T G C A T A C G T C G T A G T C A A C G T A C G T C G T A C T A G A C G T A C G T A C G T A C G T
T C G A C A T G C A G T C G T A C G A T G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T C A G T G A T C A T C G

PROP1/MA0715.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GMATWKAMTTAGT
TAATTTAATTA--
 A C T G G T A C C G T A A C G T G C A T A C G T C G T A G T C A A C G T A C G T C G T A C T A G A C G T
G C A T C G T A C T G A G C A T G A C T C G A T G T C A C T G A C G A T G A C T C G T A A C G T A C G T

PH0001.1_Alx3/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GMATWKAMTTAGT---
NTNAGCTAATTAGTTNA
 A C G T A C T G G T A C C G T A A C G T G C A T A C G T C G T A G T C A A C G T A C G T C G T A C T A G A C G T A C G T A C G T A C G T
A G T C C G A T A T G C T C G A C T A G G A T C A G C T G T C A C T G A A G C T A C G T C T G A C T A G A G C T C G A T A G C T G C T A

Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GMATWKAMTTAGT
--ADBTAATTAR-
 A C T G G T A C C G T A A C G T G C A T A C G T C G T A G T C A A C G T A C G T C G T A C T A G A C G T
A C G T A C G T C G T A C G T A A G C T G A C T T G C A G T C A A C G T A G C T C T G A T C A G A C G T

PH0101.1_Lmx1b/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GMATWKAMTTAGT---
AGTTTTTAATTAATTTG
 A C G T A C T G G T A C C G T A A C G T G C A T A C G T C G T A G T C A A C G T A C G T C G T A C T A G A C G T A C G T A C G T A C G T
T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G

VSX2/MA0726.1/Jaspar

Match Rank:9
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GMATWKAMTTAGT
----NTAATTAG-
 A C T G G T A C C G T A A C G T G C A T A C G T C G T A G T C A A C G T A C G T C G T A C T A G A C G T
A C G T A C G T A C G T A C G T T G A C G A C T C G T A C T G A A C G T C G A T C T G A T C A G A C G T

PH0106.1_Msx1/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GMATWKAMTTAGT--
TGCAACTAATTAATTC
 A C G T A C T G G T A C C G T A A C G T G C A T A C G T C G T A G T C A A C G T A C G T C G T A C T A G A C G T A C G T A C G T
A C G T T C A G G T A C G C T A C T G A G A T C G A C T G T C A C G T A C G A T C G A T C T G A C T G A A C G T G C A T G T A C