Information for 1-TCTMTCYTGAAGGCCT (Motif 1)

A G C T A G T C A G C T G T A C C G A T A G T C A G T C A C G T A T C G C T G A C G T A A T C G T C A G A G T C G A T C A G C T
Reverse Opposite:
C T G A C A T G A C T G A G T C A T G C C G A T A G C T A T G C C G T A C T A G C T A G C G T A A C G T C T G A C T A G C T G A
p-value:1e-15
log p-value:-3.551e+01
Information Content per bp:1.708
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif11.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets43.1 +/- 30.7bp
Average Position of motif in Background49.3 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.59
Offset:10
Orientation:forward strand
Alignment:TCTMTCYTGAAGGCCT--
----------AGGCCTNG
 A G C T A G T C A G C T G T A C C G A T A G T C A G T C A C G T A T C G C T G A C G T A A T C G T C A G A G T C G A T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.56
Offset:10
Orientation:forward strand
Alignment:TCTMTCYTGAAGGCCT--
----------AGGCCTAG
 A G C T A G T C A G C T G T A C C G A T A G T C A G T C A C G T A T C G C T G A C G T A A T C G T C A G A G T C G A T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.52
Offset:6
Orientation:forward strand
Alignment:TCTMTCYTGAAGGCCT
------NTCAAGGTCA
 A G C T A G T C A G C T G T A C C G A T A G T C A G T C A C G T A T C G C T G A C G T A A T C G T C A G A G T C G A T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TCTMTCYTGAAGGCCT
NNTNTCATGAATGT--
 A G C T A G T C A G C T G T A C C G A T A G T C A G T C A C G T A T C G C T G A C G T A A T C G T C A G A G T C G A T C A G C T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:TCTMTCYTGAAGGCCT
-----GTTAATGGCC-
 A G C T A G T C A G C T G T A C C G A T A G T C A G T C A C G T A T C G C T G A C G T A A T C G T C A G A G T C G A T C A G C T
A C G T A C G T A C G T A C G T A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.48
Offset:9
Orientation:reverse strand
Alignment:TCTMTCYTGAAGGCCT-------
---------CAGGCCNNGGCCNN
 A G C T A G T C A G C T G T A C C G A T A G T C A G T C A C G T A T C G C T G A C G T A A T C G T C A G A G T C G A T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Nr5a2/MA0505.1/Jaspar

Match Rank:7
Score:0.47
Offset:3
Orientation:forward strand
Alignment:TCTMTCYTGAAGGCCT--
---AAGTTCAAGGTCAGC
 A G C T A G T C A G C T G T A C C G A T A G T C A G T C A C G T A T C G C T G A C G T A A T C G T C A G A G T C G A T C A G C T A C G T A C G T
A C G T A C G T A C G T T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:8
Score:0.47
Offset:2
Orientation:forward strand
Alignment:TCTMTCYTGAAGGCCT
--TCACCTCTGGGCAG
 A G C T A G T C A G C T G T A C C G A T A G T C A G T C A C G T A T C G C T G A C G T A A T C G T C A G A G T C G A T C A G C T
A C G T A C G T G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.47
Offset:6
Orientation:forward strand
Alignment:TCTMTCYTGAAGGCCT
------BTCAAGGTCA
 A G C T A G T C A G C T G T A C C G A T A G T C A G T C A C G T A T C G C T G A C G T A A T C G T C A G A G T C G A T C A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:TCTMTCYTGAAGGCCT
----GCCTCAGGGCAT
 A G C T A G T C A G C T G T A C C G A T A G T C A G T C A C G T A T C G C T G A C G T A A T C G T C A G A G T C G A T C A G C T
A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T