Information for 1-GASGYTTKGKAGC (Motif 2)

A C T G G T C A A T G C A T C G A G C T A C G T A G C T C A T G T A C G C A T G C T G A C T A G A T G C
Reverse Opposite:
T A C G A G T C A G C T G T A C A G T C G T A C C T G A C G T A C T G A A T G C T A C G A C G T A G T C
p-value:1e-11
log p-value:-2.728e+01
Information Content per bp:1.856
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.4 +/- 28.8bp
Average Position of motif in Background59.2 +/- 2.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:GASGYTTKGKAGC
-------CGGAGC
 A C T G G T C A A T G C A T C G A G C T A C G T A G C T C A T G T A C G C A T G C T G A C T A G A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GASGYTTKGKAGC----
-NNNTTAGGTAGCNTNT
 A C T G G T C A A T G C A T C G A G C T A C G T A G C T C A T G T A C G C A T G C T G A C T A G A T G C A C G T A C G T A C G T A C G T
A C G T A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.52
Offset:9
Orientation:forward strand
Alignment:GASGYTTKGKAGC-
---------CAGCC
 A C T G G T C A A T G C A T C G A G C T A C G T A G C T C A T G T A C G C A T G C T G A C T A G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----GASGYTTKGKAGC
NNNGTGACCTTTGNNN--
 A C G T A C G T A C G T A C G T A C G T A C T G G T C A A T G C A T C G A G C T A C G T A G C T C A T G T A C G C A T G C T G A C T A G A T G C
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.51
Offset:-5
Orientation:reverse strand
Alignment:-----GASGYTTKGKAGC
NNNNTGACCTTTNNNN--
 A C G T A C G T A C G T A C G T A C G T A C T G G T C A A T G C A T C G A G C T A C G T A G C T C A T G T A C G C A T G C T G A C T A G A T G C
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GASGYTTKGKAGC
-AAGCTTG-----
 A C T G G T C A A T G C A T C G A G C T A C G T A G C T C A T G T A C G C A T G C T G A C T A G A T G C
A C G T C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:7
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--GASGYTTKGKAGC
AAGAGGATTAG----
 A C G T A C G T A C T G G T C A A T G C A T C G A G C T A C G T A G C T C A T G T A C G C A T G C T G A C T A G A T G C
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:GASGYTTKGKAGC----
-------GGGAGGACNG
 A C T G G T C A A T G C A T C G A G C T A C G T A G C T C A T G T A C G C A T G C T G A C T A G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.49
Offset:2
Orientation:forward strand
Alignment:GASGYTTKGKAGC-
--GRTGMTRGAGCC
 A C T G G T C A A T G C A T C G A G C T A C G T A G C T C A T G T A C G C A T G C T G A C T A G A T G C A C G T
A C G T A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

PB0155.1_Osr2_2/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GASGYTTKGKAGC----
-NNTGTAGGTAGCANNT
 A C T G G T C A A T G C A T C G A G C T A C G T A G C T C A T G T A C G C A T G C T G A C T A G A T G C A C G T A C G T A C G T A C G T
A C G T A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T