Information for 5-GGMWTTTAWRCCA (Motif 14)

A C T G C T A G G T A C C G A T A C G T A C G T A C G T G T C A C G A T C T A G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C C G T A A C G T C G T A C G T A C G T A C G T A A C T G A G T C A G T C
p-value:1e-8
log p-value:-1.927e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.0 +/- 19.2bp
Average Position of motif in Background55.9 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL012.1_TATA-Box/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----GGMWTTTAWRCCA
NNNNNNCTTTTATAN--
 A C G T A C G T A C G T A C G T A C T G C T A G G T A C C G A T A C G T A C G T A C G T G T C A C G A T C T A G A G T C A G T C C G T A
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GGMWTTTAWRCCA
NNNNNNCTTTTATAN--
 A C G T A C G T A C G T A C G T A C T G C T A G G T A C C G A T A C G T A C G T A C G T G T C A C G A T C T A G A G T C A G T C C G T A
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGMWTTTAWRCCA
--NTTTTATGAC-
 A C T G C T A G G T A C C G A T A C G T A C G T A C G T G T C A C G A T C T A G A G T C A G T C C G T A
A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T

CDX2/MA0465.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GGMWTTTAWRCCA-
---TTTTATGGCTN
 A C T G C T A G G T A C C G A T A C G T A C G T A C G T G T C A C G A T C T A G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGMWTTTAWRCCA
-DGWTTTATGRCN
 A C T G C T A G G T A C C G A T A C G T A C G T A C G T G T C A C G A T C T A G A G T C A G T C C G T A
A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

CDX1/MA0878.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GGMWTTTAWRCCA
---TTTTATTGC-
 A C T G C T A G G T A C C G A T A C G T A C G T A C G T G T C A C G A T C T A G A G T C A G T C C G T A
A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGMWTTTAWRCCA---
-ANATTTTTGCAANTN
 A C T G C T A G G T A C C G A T A C G T A C G T A C G T G T C A C G A T C T A G A G T C A G T C C G T A A C G T A C G T A C G T
A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

TATA-Box(TBP)/Promoter/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GGMWTTTAWRCCA
-CCTTTTATAGNC
 A C T G C T A G G T A C C G A T A C G T A C G T A C G T G T C A C G A T C T A G A G T C A G T C C G T A
A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

PH0064.1_Hoxb9/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGMWTTTAWRCCA--
NGANTTTTATGGCTCN
 A C G T A C T G C T A G G T A C C G A T A C G T A C G T A C G T G T C A C G A T C T A G A G T C A G T C C G T A A C G T A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

Barhl1/MA0877.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGMWTTTAWRCCA
NNCAATTANN---
 A C T G C T A G G T A C C G A T A C G T A C G T A C G T G T C A C G A T C T A G A G T C A G T C C G T A
T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C A C G T A C G T A C G T