Information for 9-MAYGTSCTCYTAATCK (Motif 13)

G T A C C G T A A G T C A C T G A C G T A T C G A G T C A C G T A G T C A G T C A G C T C G T A C G T A A C G T A G T C A C G T
Reverse Opposite:
G T C A A C T G C G T A C G A T A C G T C T G A C T A G A C T G C G T A A C T G T A C G C G T A T A G C C T A G A C G T A C T G
p-value:1e-8
log p-value:-2.037e+01
Information Content per bp:1.857
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.4 +/- 27.1bp
Average Position of motif in Background72.9 +/- 9.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC2/MA0891.1/Jaspar

Match Rank:1
Score:0.60
Offset:8
Orientation:forward strand
Alignment:MAYGTSCTCYTAATCK--
--------CCTAATCCGC
 G T A C C G T A A G T C A C T G A C G T A T C G A G T C A C G T A G T C A G T C A G C T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:2
Score:0.60
Offset:9
Orientation:reverse strand
Alignment:MAYGTSCTCYTAATCK-
---------YTAATCCY
 G T A C C G T A A G T C A C T G A C G T A T C G A G T C A C G T A G T C A G T C A G C T C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C

OTX1/MA0711.1/Jaspar

Match Rank:3
Score:0.59
Offset:9
Orientation:forward strand
Alignment:MAYGTSCTCYTAATCK-
---------TTAATCCG
 G T A C C G T A A G T C A C T G A C G T A T C G A G T C A C G T A G T C A G T C A G C T C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G

GSC/MA0648.1/Jaspar

Match Rank:4
Score:0.59
Offset:8
Orientation:forward strand
Alignment:MAYGTSCTCYTAATCK--
--------GCTAATCCCC
 G T A C C G T A A G T C A C T G A C G T A T C G A G T C A C G T A G T C A G T C A G C T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C

PB0185.1_Tcf1_2/Jaspar

Match Rank:5
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:MAYGTSCTCYTAATCK------
--------NNTAATCCNGNCNN
 G T A C C G T A A G T C A C T G A C G T A T C G A G T C A C G T A G T C A G T C A G C T C G T A C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

OTX2/MA0712.1/Jaspar

Match Rank:6
Score:0.58
Offset:9
Orientation:forward strand
Alignment:MAYGTSCTCYTAATCK-
---------TTAATCCT
 G T A C C G T A A G T C A C T G A C G T A T C G A G T C A C G T A G T C A G T C A G C T C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:7
Score:0.58
Offset:8
Orientation:forward strand
Alignment:MAYGTSCTCYTAATCK
--------GCTAATCC
 G T A C C G T A A G T C A C T G A C G T A T C G A G T C A C G T A G T C A G T C A G C T C G T A C G T A A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C

VENTX/MA0724.1/Jaspar

Match Rank:8
Score:0.58
Offset:9
Orientation:reverse strand
Alignment:MAYGTSCTCYTAATCK--
---------CTAATCGNT
 G T A C C G T A A G T C A C T G A C G T A T C G A G T C A C G T A G T C A G T C A G C T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.58
Offset:8
Orientation:forward strand
Alignment:MAYGTSCTCYTAATCK--
--------NYTAATCCYB
 G T A C C G T A A G T C A C T G A C G T A T C G A G T C A C G T A G T C A G T C A G C T C G T A C G T A A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.57
Offset:8
Orientation:forward strand
Alignment:MAYGTSCTCYTAATCK-
--------CTTAATCCC
 G T A C C G T A A G T C A C T G A C G T A T C G A G T C A C G T A G T C A G T C A G C T C G T A C G T A A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C