Information for 8-ATGAATTCTGMMA (Motif 5)

C G T A A C G T C T A G C G T A C T G A A C G T A G C T A G T C A C G T A C T G G T C A G T C A C G T A
Reverse Opposite:
A C G T A C G T A C G T A G T C C G T A A C T G C T G A C G T A A G C T A C G T A G T C C G T A A C G T
p-value:1e-11
log p-value:-2.686e+01
Information Content per bp:1.914
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.2 +/- 27.4bp
Average Position of motif in Background48.1 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATGAATTCTGMMA
-TGAATTATGCAT
 C G T A A C G T C T A G C G T A C T G A A C G T A G C T A G T C A C G T A C T G G T C A G T C A C G T A
A C G T C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

PB0178.1_Sox8_2/Jaspar

Match Rank:2
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------ATGAATTCTGMMA
NNTNTCATGAATGT-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C T A G C G T A C T G A A C G T A G C T A G T C A C G T A C T G G T C A G T C A C G T A
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATGAATTCTGMMA
TNNNATGATTTCNNCNN
 A C G T A C G T A C G T A C G T C G T A A C G T C T A G C G T A C T G A A C G T A G C T A G T C A C G T A C T G G T C A G T C A C G T A
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

POU4F3/MA0791.1/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATGAATTCTGMMA
CTCATTAATTATGCAT
 A C G T A C G T A C G T C G T A A C G T C T A G C G T A C T G A A C G T A G C T A G T C A C G T A C T G G T C A G T C A C G T A
A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T

PB0171.1_Sox18_2/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATGAATTCTGMMA
NNNNTGAATTCANNNC
 A C G T A C G T A C G T C G T A A C G T C T A G C G T A C T G A A C G T A G C T A G T C A C G T A C T G G T C A G T C A C G T A
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

POU4F1/MA0790.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ATGAATTCTGMMA
CATTAATTATTCAT
 A C G T C G T A A C G T C T A G C G T A C T G A A C G T A G C T A G T C A C G T A C T G G T C A G T C A C G T A
G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATGAATTCTGMMA
WYATGCATWATGCAT
 A C G T A C G T C G T A A C G T C T A G C G T A C T G A A C G T A G C T A G T C A C G T A C T G G T C A G T C A C G T A
C G T A A G C T C G T A A C G T A C T G G T A C C G T A A C G T C G A T C G T A A C G T A C T G A G T C C G T A C G A T

OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATGAATTCTGMMA
TCATGAATWATTCAT
 A C G T A C G T C G T A A C G T C T A G C G T A C T G A A C G T A G C T A G T C A C G T A C T G G T C A G T C A C G T A
G A C T G A T C G C T A C G A T C T A G G T C A C G T A C G A T G C A T C G T A G C A T C A G T A G T C G T C A C A G T

CEBPA/MA0102.3/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ATGAATTCTGMMA-
---NATTGTGCAAT
 C G T A A C G T C T A G C G T A C T G A A C G T A G C T A G T C A C G T A C T G G T C A G T C A C G T A A C G T
A C G T A C G T A C G T C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T

POU4F2/MA0683.1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ATGAATTCTGMMA
CTCATTAATTATGCAT
 A C G T A C G T A C G T C G T A A C G T C T A G C G T A C T G A A C G T A G C T A G T C A C G T A C T G G T C A G T C A C G T A
A G T C G A C T T G A C T G C A A G C T G A C T C G T A C G T A C G A T G C A T C G T A C G A T C A T G G A T C C T G A G A C T