Information for 4-TCCCACAGCTAGGGGG (Motif 2)

C G A T T A G C G A T C G T A C T C G A A G T C G T C A C T A G T G A C G A C T C T G A A C T G C T A G A C T G A C T G A T C G
Reverse Opposite:
A T G C A G T C G T A C G A T C T A G C G A C T C T G A A C T G G A T C A C G T T C A G A G C T C A T G C T A G A T C G C G T A
p-value:1e-23
log p-value:-5.488e+01
Information Content per bp:1.689
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.07%
Number of Background Sequences with motif17.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.1 +/- 19.6bp
Average Position of motif in Background54.9 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC1/MA0696.1/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TCCCACAGCTAGGGGG-
---CACAGCGGGGGGTC
 C G A T T A G C G A T C G T A C T C G A A G T C G T C A C T A G T G A C G A C T C T G A A C T G C T A G A C T G A C T G A T C G A C G T
A C G T A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

ZIC3/MA0697.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TCCCACAGCTAGGGGG-
--NCGCAGCGGGGGGTC
 C G A T T A G C G A T C G T A C T C G A A G T C G T C A C T A G T G A C G A C T C T G A A C T G C T A G A C T G A C T G A T C G A C G T
A C G T A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

ZIC4/MA0751.1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TCCCACAGCTAGGGGG-
--NCNCAGCGGGGGGTC
 C G A T T A G C G A T C G T A C T C G A A G T C G T C A C T A G T G A C G A C T C T G A A C T G C T A G A C T G A C T G A T C G A C G T
A C G T A C G T C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TCCCACAGCTAGGGGG
---CACAGCAGGGGG-
 C G A T T A G C G A T C G T A C T C G A A G T C G T C A C T A G T G A C G A C T C T G A A C T G C T A G A C T G A C T G A T C G
A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TCCCACAGCTAGGGGG-
--DCHCAGCAGGRGGCC
 C G A T T A G C G A T C G T A C T C G A A G T C G T C A C T A G T G A C G A C T C T G A A C T G C T A G A C T G A C T G A T C G A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TCCCACAGCTAGGGGG--------
----GCCASCAGGGGGCGCYVNNG
 C G A T T A G C G A T C G T A C T C G A A G T C G T C A C T A G T G A C G A C T C T G A A C T G C T A G A C T G A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCCCACAGCTAGGGGG-----
--TGGCCACCAGGGGGCGCTA
 C G A T T A G C G A T C G T A C T C G A A G T C G T C A C T A G T G A C G A C T C T G A A C T G C T A G A C T G A C T G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCCCACAGCTAGGGGG
--NAACAGCTGG----
 C G A T T A G C G A T C G T A C T C G A A G T C G T C A C T A G T G A C G A C T C T G A A C T G C T A G A C T G A C T G A T C G
A C G T A C G T C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:TCCCACAGCTAGGGGG
---AACATCTGGA---
 C G A T T A G C G A T C G T A C T C G A A G T C G T C A C T A G T G A C G A C T C T G A A C T G C T A G A C T G A C T G A T C G
A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A A C G T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TCCCACAGCTAGGGGG----
---TGCGCATAGGGGAGGAG
 C G A T T A G C G A T C G T A C T C G A A G T C G T C A C T A G T G A C G A C T C T G A A C T G C T A G A C T G A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G