Information for 5-AGGCTCAGTGCAA (Motif 6)

C T G A T C A G A C T G A T G C C A G T A G T C G C T A A C T G A G C T A T C G A G T C G T C A C T G A
Reverse Opposite:
A G C T A C G T C T A G A T G C C T G A A G T C C G A T A C T G G C T A T A C G A G T C A G T C G A C T
p-value:1e-13
log p-value:-3.137e+01
Information Content per bp:1.764
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.66%
Number of Background Sequences with motif38.5
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets45.6 +/- 32.5bp
Average Position of motif in Background53.1 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AGGCTCAGTGCAA-----
YCAGGCWCAGTACCAGGCTC
 A C G T A C G T C T G A T C A G A C T G A T G C C A G T A G T C G C T A A C T G A G C T A T C G A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGGCTCAGTGCAA
TTGGCATGGTGCCA
 A C G T C T G A T C A G A C T G A T G C C A G T A G T C G C T A A C T G A G C T A T C G A G T C G T C A C T G A
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGGCTCAGTGCAA--
TTGGCANNNTGCCAAG
 A C G T C T G A T C A G A C T G A T G C C A G T A G T C G C T A A C T G A G C T A T C G A G T C G T C A C T G A A C G T A C G T
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AGGCTCAGTGCAA
GCCGCGCAGTGCGT
 A C G T C T G A T C A G A C T G A T G C C A G T A G T C G C T A A C T G A G C T A T C G A G T C G T C A C T G A
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

RHOXF1/MA0719.1/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:AGGCTCAGTGCAA
NGGATTAN-----
 C T G A T C A G A C T G A T G C C A G T A G T C G C T A A C T G A G C T A T C G A G T C G T C A C T G A
C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGGCTCAGTGCAA
--GCTCCG-----
 C T G A T C A G A C T G A T G C C A G T A G T C G C T A A C T G A G C T A T C G A G T C G T C A C T G A
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AGGCTCAGTGCAA----
AATCGCACTGCATTCCG
 C T G A T C A G A C T G A T G C C A G T A G T C G C T A A C T G A G C T A T C G A G T C G T C A C T G A A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AGGCTCAGTGCAA
-AGGTCAAGGTCA
 C T G A T C A G A C T G A T G C C A G T A G T C G C T A A C T G A G C T A T C G A G T C G T C A C T G A
A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGGCTCAGTGCAA
AGRGGTCA------
 A C G T C T G A T C A G A C T G A T G C C A G T A G T C G C T A A C T G A G C T A T C G A G T C G T C A C T G A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--AGGCTCAGTGCAA
CAAAGGTCAG-----
 A C G T A C G T C T G A T C A G A C T G A T G C C A G T A G T C G C T A A C T G A G C T A T C G A G T C G T C A C T G A
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T A C G T