Information for 4-GGGCAAATGCTCA (Motif 4)

C A T G A C T G A C T G A G T C G T C A C G T A G T C A A G C T A T C G G T A C C G A T G T A C C G T A
Reverse Opposite:
A C G T A C T G G C T A A C T G A T G C C T G A C A G T A C G T A C G T A C T G A G T C A G T C G T A C
p-value:1e-15
log p-value:-3.675e+01
Information Content per bp:1.821
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.7 +/- 22.6bp
Average Position of motif in Background32.3 +/- 12.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rarg/MA0859.1/Jaspar

Match Rank:1
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGGCAAATGCTCA-
AAGGTCAAAAGGTCAA
 A C G T A C G T C A T G A C T G A C T G A G T C G T C A C G T A G T C A A G C T A T C G G T A C C G A T G T A C C G T A A C G T
T C G A T C G A C T A G A C T G A C G T A G T C T C G A C G T A C T G A T C G A A C T G A C T G A C G T A G T C T C G A G C T A

Rarb/MA0857.1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGGCAAATGCTCA
AAAGGTCAAAAGGTCA
 A C G T A C G T A C G T C A T G A C T G A C T G A G T C G T C A C G T A G T C A A G C T A T C G G T A C C G A T G T A C C G T A
G C T A C T G A T C G A A C T G A C T G C A G T A T G C C T G A G C T A C T G A C T G A C T A G A C T G A G C T A G T C C T G A

RXRB/MA0855.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGGCAAATGCTCA
GGGGTCAAAGGTCA
 A C G T C A T G A C T G A C T G A G T C G T C A C G T A G T C A A G C T A T C G G T A C C G A T G T A C C G T A
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGGCAAATGCTCA
GAGGTCAAAAGGTCA
 A C G T A C G T C A T G A C T G A C T G A G T C G T C A C G T A G T C A A G C T A T C G G T A C C G A T G T A C C G T A
T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A

Rxra/MA0512.2/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGGCAAATGCTCA
GGGGTCAAAGGTCA
 A C G T C A T G A C T G A C T G A G T C G T C A C G T A G T C A A G C T A T C G G T A C C G A T G T A C C G T A
T C A G T C A G C A T G C A T G A C G T A G T C T C G A C T G A T C G A A T C G A C T G A C G T A G T C T C G A

RXRG/MA0856.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GGGCAAATGCTCA
GGGGTCAAAGGTCA
 A C G T C A T G A C T G A C T G A G T C G T C A C G T A G T C A A G C T A T C G G T A C C G A T G T A C C G T A
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

THAP1/MA0597.1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAAATGCTCA
TNNGGGCAG-------
 A C G T A C G T A C G T C A T G A C T G A C T G A G T C G T C A C G T A G T C A A G C T A T C G G T A C C G A T G T A C C G T A
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGGCAAATGCTCA
TGGGGCAAAGGTCA
 A C G T C A T G A C T G A C T G A G T C G T C A C G T A G T C A A G C T A T C G G T A C C G A T G T A C C G T A
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

RARA/MA0729.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGGCAAATGCTCA---
GAGGTCAAAAGGTCAATG
 A C G T A C G T C A T G A C T G A C T G A G T C G T C A C G T A G T C A A G C T A T C G G T A C C G A T G T A C C G T A A C G T A C G T A C G T
C T A G T C G A A C T G C A T G A G C T T A G C C T G A C G T A C G T A T G C A A C T G A C T G C G A T A G T C C T G A G C T A C A G T A C T G

Nr2f6/MA0677.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGGCAAATGCTCA
GAGGTCAAAGGTCA
 A C G T C A T G A C T G A C T G A G T C G T C A C G T A G T C A A G C T A T C G G T A C C G A T G T A C C G T A
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A