Information for 14-TTTAGTCCCA (Motif 27)

A C G T A C G T A C G T C G T A A C T G A C G T A G T C A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A C T G C G T A A G T C A C G T C G T A C G T A C G T A
p-value:1e-5
log p-value:-1.380e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.5 +/- 12.8bp
Average Position of motif in Background39.8 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0124.1_Obox5_1/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TTTAGTCCCA---
NANANTTAATCCCNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A G T C A G T C C G T A A C G T A C G T A C G T
C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A

PH0137.1_Pitx1/Jaspar

Match Rank:2
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTTAGTCCCA----
NTTGTTAATCCCTCTNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

PH0125.1_Obox5_2/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TTTAGTCCCA---
GATAATTAATCCCTCTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A G T C A G T C C G T A A C G T A C G T A C G T
A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

Pitx1/MA0682.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TTTAGTCCCA
-TTAATCCC-
 A C G T A C G T A C G T C G T A A C T G A C G T A G T C A G T C A G T C C G T A
A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T

PH0121.1_Obox1/Jaspar

Match Rank:5
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTTAGTCCCA----
NTAGTTAATCCCCTTAN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

PH0122.1_Obox2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTTAGTCCCA----
ATAGTTAATCCCCCTCA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G C T A C A G T G T A C A G T C G A T C G A T C G A T C A G C T T G A C G C T A

PH0130.1_Otx2/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TTTAGTCCCA---
GANNATTAATCCCTNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A G T C A G T C C G T A A C G T A C G T A C G T
C A T G G T C A G A T C C T G A T C G A G A C T C G A T C G T A C G T A C A G T G A T C A G T C A G T C A G C T G C T A G A T C G T C A

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTTAGTCCCA
CTTAATCCC-
 A C G T A C G T A C G T C G T A A C T G A C G T A G T C A G T C A G T C C G T A
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T

PH0123.1_Obox3/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TTTAGTCCCA----
ATAGTTAATCCCCCNNA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

OTX2/MA0712.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TTTAGTCCCA
-TTAATCCT-
 A C G T A C G T A C G T C G T A A C T G A C G T A G T C A G T C A G T C C G T A
A C G T G A C T G C A T C G T A C G T A C A G T G A T C A G T C A C G T A C G T