Information for 11-GCAGCTGCAC (Motif 24)

T A C G G T A C T C G A C A T G A T G C G A C T A C T G G A T C T C G A T G A C
Reverse Opposite:
A C T G A G C T C T A G T G A C C T G A T A C G G T A C A G C T C A T G A T G C
p-value:1e-6
log p-value:-1.523e+01
Information Content per bp:1.552
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif4.52%
Number of Background Sequences with motif830.9
Percentage of Background Sequences with motif1.76%
Average Position of motif in Targets55.3 +/- 23.6bp
Average Position of motif in Background49.2 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCTGCAC
CGCAGCTGCG-
 A C G T T A C G G T A C T C G A C A T G A T G C G A C T A C T G G A T C T C G A T G A C
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCTGCAC
CAGCAGCTGN--
 A C G T A C G T T A C G G T A C T C G A C A T G A T G C G A C T A C T G G A T C T C G A T G A C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:3
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--GCAGCTGCAC
NNACAGCTGC--
 A C G T A C G T T A C G G T A C T C G A C A T G A T G C G A C T A C T G G A T C T C G A T G A C
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---GCAGCTGCAC
NNAGCAGCTGCT-
 A C G T A C G T A C G T T A C G G T A C T C G A C A T G A T G C G A C T A C T G G A T C T C G A T G A C
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTGCAC
GACAGCTGCAG
 A C G T T A C G G T A C T C G A C A T G A T G C G A C T A C T G G A T C T C G A T G A C
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTGCAC
ANCAGCTG---
 A C G T T A C G G T A C T C G A C A T G A T G C G A C T A C T G G A T C T C G A T G A C
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.78
Offset:-4
Orientation:reverse strand
Alignment:----GCAGCTGCAC
NGNGACAGCTGCN-
 A C G T A C G T A C G T A C G T T A C G G T A C T C G A C A T G A T G C G A C T A C T G G A T C T C G A T G A C
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTGCAC
AACAGCTGCAG
 A C G T T A C G G T A C T C G A C A T G A T G C G A C T A C T G G A T C T C G A T G A C
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

Ascl2/MA0816.1/Jaspar

Match Rank:9
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GCAGCTGCAC
AGCAGCTGCT-
 A C G T T A C G G T A C T C G A C A T G A T G C G A C T A C T G G A T C T C G A T G A C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:10
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--GCAGCTGCAC
BAACAGCTGT--
 A C G T A C G T T A C G G T A C T C G A C A T G A T G C G A C T A C T G G A T C T C G A T G A C
A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T A C G T