Information for 12-GGCTCCGGTTTGC (Motif 23)

A C T G A C T G A G T C A C G T A G T C A G T C A C T G A C T G A C G T A C G T A C G T A C T G A G T C
Reverse Opposite:
A C T G A G T C C G T A C G T A C G T A A G T C A G T C A C T G A C T G C G T A A C T G A G T C A G T C
p-value:1e-7
log p-value:-1.655e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets23.5 +/- 10.3bp
Average Position of motif in Background57.9 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GGCTCCGGTTTGC
-GCTCCG------
 A C T G A C T G A G T C A C G T A G T C A G T C A C T G A C T G A C G T A C G T A C G T A C T G A G T C
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

TFCP2/MA0145.3/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GGCTCCGGTTTGC
-AAACCGGTTT--
 A C T G A C T G A G T C A C G T A G T C A G T C A C T G A C T G A C G T A C G T A C G T A C T G A G T C
A C G T C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGCTCCGGTTTGC
TGCTGTGATTT--
 A C T G A C T G A G T C A C G T A G T C A G T C A C T G A C T G A C G T A C G T A C G T A C T G A G T C
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GGCTCCGGTTTGC
--TTGCGGTTT--
 A C T G A C T G A G T C A C G T A G T C A G T C A C T G A C T G A C G T A C G T A C G T A C T G A G T C
A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T

ETV2/MA0762.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGCTCCGGTTTGC
TATTTCCGGTT---
 A C G T A C T G A C T G A G T C A C G T A G T C A G T C A C T G A C T G A C G T A C G T A C G T A C T G A G T C
G A C T T C G A A G C T C G A T A C G T A G T C A G T C A C T G A T C G A G C T G A C T A C G T A C G T A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GGCTCCGGTTTGC-
---TCCTGTTTACA
 A C T G A C T G A G T C A C G T A G T C A G T C A C T G A C T G A C G T A C G T A C G T A C T G A G T C A C G T
A C G T A C G T A C G T C A G T A T G C A G T C A C G T A C T G A C G T A C G T A C G T G C T A A G T C G C T A

PB0077.1_Spdef_1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGCTCCGGTTTGC-
GTACATCCGGATTTTT
 A C G T A C G T A C T G A C T G A G T C A C G T A G T C A G T C A C T G A C T G A C G T A C G T A C G T A C T G A G T C A C G T
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GGCTCCGGTTTGC
--CTGTGGTTTN-
 A C T G A C T G A G T C A C G T A G T C A G T C A C T G A C T G A C G T A C G T A C G T A C T G A G T C
A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGCTCCGGTTTGC
ACATCCTGNT---
 A C T G A C T G A G T C A C G T A G T C A G T C A C T G A C T G A C G T A C G T A C G T A C T G A G T C
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T

SPDEF/MA0686.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGCTCCGGTTTGC
TACATCCGGGT---
 A C G T A C T G A C T G A G T C A C G T A G T C A G T C A C T G A C T G A C G T A C G T A C G T A C T G A G T C
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T A C G T A C G T A C G T