Information for 10-TGCCAAGGAA (Motif 22)

A C G T A C T G A G T C A G T C C G T A G T C A A C T G A C T G C G T A C G T A
Reverse Opposite:
A C G T C G A T A G T C A G T C A C G T A C G T A C T G A C T G A G T C C G T A
p-value:1e-7
log p-value:-1.663e+01
Information Content per bp:1.950
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif28.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets52.5 +/- 17.8bp
Average Position of motif in Background53.7 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--TGCCAAGGAA
GGTGCCAAGT--
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A G T C A A C T G A C T G C G T A C G T A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TGCCAAGGAA
TTGCCAAG---
 A C G T A C G T A C T G A G T C A G T C C G T A G T C A A C T G A C T G C G T A C G T A
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--TGCCAAGGAA
CGTGCCAAG---
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A G T C A A C T G A C T G C G T A C G T A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGCCAAGGAA
TGCCAA----
 A C G T A C T G A G T C A G T C C G T A G T C A A C T G A C T G C G T A C G T A
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGCCAAGGAA--
GTTGCCATGGNAAC
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A G T C A A C T G A C T G C G T A C G T A A C G T A C G T
A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGCCAAGGAA
TGCCCAGNHW
 A C G T A C T G A G T C A G T C C G T A G T C A A C T G A C T G C G T A C G T A
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TGCCAAGGAA-
GGTTGCCATGGCAA
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A G T C A A C T G A C T G C G T A C G T A A C G T
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TGCCAAGGAA
ATGCCAACC--
 A C G T A C G T A C T G A G T C A G T C C G T A G T C A A C T G A C T G C G T A C G T A
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:9
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TGCCAAGGAA-
NGTTGCCATGGCAA
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A G T C A A C T G A C T G C G T A C G T A A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:10
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGCCAAGGAA
TTCTNMGGAA
 A C G T A C T G A G T C A G T C C G T A G T C A A C T G A C T G C G T A C G T A
C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A