Information for 11-GATCCCCTGTGCG (Motif 19)

A C T G C G T A A C G T A G T C A G T C A T G C A G T C A C G T A C T G A C G T A C T G A G T C A T C G
Reverse Opposite:
A T G C A C T G A G T C C G T A A G T C C G T A A C T G A T C G C T A G A C T G C G T A A C G T A G T C
p-value:1e-8
log p-value:-1.931e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.2 +/- 29.3bp
Average Position of motif in Background9.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GATCCCCTGTGCG
-----GCTGTG--
 A C T G C G T A A C G T A G T C A G T C A T G C A G T C A C G T A C T G A C G T A C T G A G T C A T C G
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GATCCCCTGTGCG--
NTCNTCCCCTATNNGNN
 A C G T A C G T A C T G C G T A A C G T A G T C A G T C A T G C A G T C A C G T A C T G A C G T A C T G A G T C A T C G A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GATCCCCTGTGCG
-ATTTCCTGTN--
 A C T G C G T A A C G T A G T C A G T C A T G C A G T C A C G T A C T G A C G T A C T G A G T C A T C G
A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GATCCCCTGTGCG---
------CTGTTCCTGG
 A C T G C G T A A C G T A G T C A G T C A T G C A G T C A C G T A C T G A C G T A C T G A G T C A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

MZF1/MA0056.1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GATCCCCTGTGCG
--TCCCCA-----
 A C T G C G T A A C G T A G T C A G T C A T G C A G T C A C G T A C T G A C G T A C T G A G T C A T C G
A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GATCCCCTGTGCG
-ACCACCTGTT--
 A C T G C G T A A C G T A G T C A G T C A T G C A G T C A C G T A C T G A C G T A C T G A G T C A T C G
A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GATCCCCTGTGCG-
--TCCCCTGGGGAC
 A C T G C G T A A C G T A G T C A G T C A T G C A G T C A C G T A C T G A C G T A C T G A G T C A T C G A C G T
A C G T A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GATCCCCTGTGCG
-ATTTCCTGTN--
 A C T G C G T A A C G T A G T C A G T C A T G C A G T C A C G T A C T G A C G T A C T G A G T C A T C G
A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T A C G T A C G T

Six3/MA0631.1/Jaspar

Match Rank:9
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------GATCCCCTGTGCG
ANANGTGATACCCTATN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A T G C A G T C A C G T A C T G A C G T A C T G A G T C A T C G
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C A C G T A C G T

PH0163.1_Six3/Jaspar

Match Rank:10
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------GATCCCCTGTGCG
ANANGTGATACCCTATN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T A G T C A G T C A T G C A G T C A C G T A C T G A C G T A C T G A G T C A T C G
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C A C G T A C G T