Information for 6-CGCTGTTGAG (Motif 17)

T G A C T A C G G T A C A C G T A T C G G C A T A C G T A C T G C T G A A C T G
Reverse Opposite:
A G T C A G C T A G T C G T C A C G T A A T G C C G T A A C T G A G T C A C T G
p-value:1e-8
log p-value:-2.047e+01
Information Content per bp:1.852
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif104.1
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets38.1 +/- 26.8bp
Average Position of motif in Background49.1 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CGCTGTTGAG---
AGGACGCTGTAAAGGGA
 A C G T A C G T A C G T A C G T T G A C T A C G G T A C A C G T A T C G G C A T A C G T A C T G C T G A A C T G A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Rhox11/MA0629.1/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CGCTGTTGAG---
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C G T T G A C T A C G G T A C A C G T A T C G G C A T A C G T A C T G C T G A A C T G A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CGCTGTTGAG---
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C G T T G A C T A C G G T A C A C G T A T C G G C A T A C G T A C T G C T G A A C T G A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CGCTGTTGAG
CCCCCTGCTGTG
 A C G T A C G T T G A C T A C G G T A C A C G T A T C G G C A T A C G T A C T G C T G A A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGCTGTTGAG
-GCTGTG---
 T G A C T A C G G T A C A C G T A T C G G C A T A C G T A C T G C T G A A C T G
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CGCTGTTGAG-----
----CTTGAGTGGCT
 T G A C T A C G G T A C A C G T A T C G G C A T A C G T A C T G C T G A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CGCTGTTGAG---
-GGTGYTGACAGS
 T G A C T A C G G T A C A C G T A T C G G C A T A C G T A C T G C T G A A C T G A C G T A C G T A C G T
A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CGCTGTTGAG
--CTGTTTAC
 T G A C T A C G G T A C A C G T A T C G G C A T A C G T A C T G C T G A A C T G
A C G T A C G T A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C

PB0121.1_Foxj3_2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CGCTGTTGAG-----
NNCTTTGTTTTGNTNNN
 A C G T A C G T T G A C T A C G G T A C A C G T A T C G G C A T A C G T A C T G C T G A A C T G A C G T A C G T A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CGCTGTTGAG----
--HTGCTGAGTCAT
 T G A C T A C G G T A C A C G T A T C G G C A T A C G T A C T G C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T G T C A G C A T A C T G G T A C G A C T A C T G G C T A A T C G C A G T G T A C C G T A A G C T