Information for 5-KGTGGCGCCA (Motif 15)

A C T G A T C G C G A T A T C G A C T G A G T C C T A G A G T C T G A C T C G A
Reverse Opposite:
A G C T A C T G T C A G A G T C C T A G T G A C T A G C C G T A T A G C T G A C
p-value:1e-9
log p-value:-2.215e+01
Information Content per bp:1.715
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif4.04%
Number of Background Sequences with motif521.7
Percentage of Background Sequences with motif1.11%
Average Position of motif in Targets53.3 +/- 27.2bp
Average Position of motif in Background49.6 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.83
Offset:-3
Orientation:reverse strand
Alignment:---KGTGGCGCCA----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C T G A T C G C G A T A T C G A C T G A G T C C T A G A G T C T G A C T C G A A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---KGTGGCGCCA----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C T G A T C G C G A T A T C G A C T G A G T C C T A G A G T C T G A C T C G A A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

E2F1/MA0024.3/Jaspar

Match Rank:3
Score:0.79
Offset:0
Orientation:forward strand
Alignment:KGTGGCGCCA--
TTTGGCGCCAAA
 A C T G A T C G C G A T A T C G A C T G A G T C C T A G A G T C T G A C T C G A A C G T A C G T
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----KGTGGCGCCA-
GCGGAGGTGTCGCCTC
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G C G A T A T C G A C T G A G T C C T A G A G T C T G A C T C G A A C G T
T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

CRE(bZIP)/Promoter/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-KGTGGCGCCA-
CGGTGACGTCAC
 A C G T A C T G A T C G C G A T A T C G A C T G A G T C C T A G A G T C T G A C T C G A A C G T
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C

CREB1/MA0018.2/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:KGTGGCGCCA
--TGACGTCA
 A C T G A T C G C G A T A T C G A C T G A G T C C T A G A G T C T G A C T C G A
A C G T A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A

JDP2(var.2)/MA0656.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:KGTGGCGCCA--
GATGACGTCATC
 A C T G A T C G C G A T A T C G A C T G A G T C C T A G A G T C T G A C T C G A A C G T A C G T
A C T G T C G A A C G T A C T G C T G A A G T C T C A G A C G T G T A C C T G A A G C T A T G C

PB0004.1_Atf1_1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--KGTGGCGCCA----
ACGATGACGTCATCGA
 A C G T A C G T A C T G A T C G C G A T A T C G A C T G A G T C C T A G A G T C T G A C T C G A A C G T A C G T A C G T A C G T
C G T A A G T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C C T A G C T G A

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:KGTGGCGCCA
GATGACGTCA
 A C T G A T C G C G A T A T C G A C T G A G T C C T A G A G T C T G A C T C G A
T A C G T C G A G A C T A C T G C T G A A G T C T C A G G A C T T G A C C T G A

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-KGTGGCGCCA-
NGRTGACGTCAY
 A C G T A C T G A T C G C G A T A T C G A C T G A G T C C T A G A G T C T G A C T C G A A C G T
T A G C C T A G T C G A G A C T A C T G C T G A A G T C T C A G G C A T T G A C C T G A A G C T