Information for 4-GGCACTGTCC (Motif 13)

A C T G A C T G G T A C C T G A A T G C A C G T C T A G A C G T A G T C A T G C
Reverse Opposite:
A T C G C T A G G T C A G A T C C G T A A T C G A G C T A C T G A G T C A G T C
p-value:1e-10
log p-value:-2.367e+01
Information Content per bp:1.844
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.26%
Number of Background Sequences with motif147.6
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets65.9 +/- 23.7bp
Average Position of motif in Background46.0 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGCACTGTCC--
AGGTCANTGACCTN
 A C G T A C G T A C T G A C T G G T A C C T G A A T G C A C G T C T A G A C G T A G T C A T G C A C G T A C G T
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GGCACTGTCC
NGTGGGCAT-----
 A C G T A C G T A C G T A C G T A C T G A C T G G T A C C T G A A T G C A C G T C T A G A C G T A G T C A T G C
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGCACTGTCC
GGGAATTTCC
 A C T G A C T G G T A C C T G A A T G C A C G T C T A G A C G T A G T C A T G C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GGCACTGTCC-
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G G T A C C T G A A T G C A C G T C T A G A C G T A G T C A T G C A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGCACTGTCC
RGGGCACTAACY
 A C G T A C G T A C T G A C T G G T A C C T G A A T G C A C G T C T A G A C G T A G T C A T G C
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGCACTGTCC
GGGAATTTCC
 A C T G A C T G G T A C C T G A A T G C A C G T C T A G A C G T A G T C A T G C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GGCACTGTCC
GGTTGGCAT-----
 A C G T A C G T A C G T A C G T A C T G A C T G G T A C C T G A A T G C A C G T C T A G A C G T A G T C A T G C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGCACTGTCC-----------
GGCGCTGTCCATGGTGCTGAA
 A C T G A C T G G T A C C T G A A T G C A C G T C T A G A C G T A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GGCACTGTCC----------
GGAGCTGTCCATGGTGCTGA
 A C T G A C T G G T A C C T G A A T G C A C G T C T A G A C G T A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

HES7/MA0822.1/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGCACTGTCC-
TGGCACGTGCCA
 A C G T A C T G A C T G G T A C C T G A A T G C A C G T C T A G A C G T A G T C A T G C A C G T
G A C T T A C G C T A G A G T C C G T A A G T C A C T G A G C T C T A G A G T C A G T C C T G A