Information for 8-SRSSYGGAGWTTCTGK (Motif 9)

T A C G C T A G A T C G A T G C A G T C C T A G A C T G C T G A T A C G C G T A A G C T A C G T G T A C A C G T A T C G C A G T
Reverse Opposite:
G T C A A T G C T G C A A C T G C G T A C T G A C G A T A T G C A G C T A G T C A G T C C T A G A T C G A T G C A G T C A T G C
p-value:1e-11
log p-value:-2.741e+01
Information Content per bp:1.813
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.5 +/- 26.5bp
Average Position of motif in Background48.7 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELA/MA0107.1/Jaspar

Match Rank:1
Score:0.58
Offset:4
Orientation:forward strand
Alignment:SRSSYGGAGWTTCTGK
----GGGAATTTCC--
 T A C G C T A G A T C G A T G C A G T C C T A G A C T G C T G A T A C G C G T A A G C T A C G T G T A C A C G T A T C G C A G T
A C G T A C G T A C G T A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:forward strand
Alignment:SRSSYGGAGWTTCTGK
----GGGGATTTCC--
 T A C G C T A G A T C G A T G C A G T C C T A G A C T G C T G A T A C G C G T A A G C T A C G T G T A C A C G T A T C G C A G T
A C G T A C G T A C G T A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:SRSSYGGAGWTTCTGK
----GGGAATTTCC--
 T A C G C T A G A T C G A T G C A G T C C T A G A C T G C T G A T A C G C G T A A G C T A C G T G T A C A C G T A T C G C A G T
A C G T A C G T A C G T A C G T A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.52
Offset:7
Orientation:forward strand
Alignment:SRSSYGGAGWTTCTGK-
-------ACATCCTGNT
 T A C G C T A G A T C G A T G C A G T C C T A G A C T G C T G A T A C G C G T A A G C T A C G T G T A C A C G T A T C G C A G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:5
Score:0.52
Offset:3
Orientation:forward strand
Alignment:SRSSYGGAGWTTCTGK--
---VAGRACAKNCTGTBC
 T A C G C T A G A T C G A T G C A G T C C T A G A C T G C T G A T A C G C G T A A G C T A C G T G T A C A C G T A T C G C A G T A C G T A C G T
A C G T A C G T A C G T T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

PB0151.1_Myf6_2/Jaspar

Match Rank:6
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:SRSSYGGAGWTTCTGK----
-----GGNGCGNCTGTTNNN
 T A C G C T A G A T C G A T G C A G T C C T A G A C T G C T G A T A C G C G T A A G C T A C G T G T A C A C G T A T C G C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

HSF4/MA0771.1/Jaspar

Match Rank:7
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:SRSSYGGAGWTTCTGK--
-----GAANNTTCTAGAA
 T A C G C T A G A T C G A T G C A G T C C T A G A C T G C T G A T A C G C G T A A G C T A C G T G T A C A C G T A T C G C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G G C T A G C T A A G T C T C A G C G A T C G A T T A G C A G C T T C G A A T C G G T C A G C T A

IRF8/MA0652.1/Jaspar

Match Rank:8
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:SRSSYGGAGWTTCTGK-----
-------AGTTTCGGTTTCGN
 T A C G C T A G A T C G A T G C A G T C C T A G A C T G C T G A T A C G C G T A A G C T A C G T G T A C A C G T A T C G C A G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A C G A C G T G C A T A G C T A G T C C T A G A T C G C G A T C G A T A C G T G A T C C T A G C T G A

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:9
Score:0.50
Offset:7
Orientation:forward strand
Alignment:SRSSYGGAGWTTCTGK---
-------AGTTTCAGTTTC
 T A C G C T A G A T C G A T G C A G T C C T A G A C T G C T G A T A C G C G T A A G C T A C G T G T A C A C G T A T C G C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C

HSF1/MA0486.2/Jaspar

Match Rank:10
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:SRSSYGGAGWTTCTGK--
-----GAACGTTCTAGAA
 T A C G C T A G A T C G A T G C A G T C C T A G A C T G C T G A T A C G C G T A A G C T A C G T G T A C A C G T A T C G C A G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G G C T A C G T A A G T C T C A G C G A T C A G T A G T C A C G T T C G A A C T G G T C A G C T A