Information for 7-CKGGCAGSSGCGGTGY (Motif 8)

A T G C A C G T A C T G A C T G A T G C G T C A A C T G T A G C T A C G A C T G A G T C C T A G A C T G A C G T A C T G A G T C
Reverse Opposite:
C T A G A G T C C G T A A G T C A G T C A C T G A G T C A T G C A T C G A G T C A C G T A T C G A G T C A G T C T G C A A T C G
p-value:1e-11
log p-value:-2.741e+01
Information Content per bp:1.877
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.5 +/- 21.9bp
Average Position of motif in Background47.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CKGGCAGSSGCGGTGY
--CGCAGCTGCG----
 A T G C A C G T A C T G A C T G A T G C G T C A A C T G T A G C T A C G A C T G A G T C C T A G A C T G A C G T A C T G A G T C
A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CKGGCAGSSGCGGTGY-
-----GGGGGCGGGGCC
 A T G C A C G T A C T G A C T G A T G C G T C A A C T G T A G C T A C G A C T G A G T C C T A G A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

EGR1/MA0162.2/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CKGGCAGSSGCGGTGY
--GGCGGGGGCGGGGG
 A T G C A C G T A C T G A C T G A T G C G T C A A C T G T A G C T A C G A C T G A G T C C T A G A C T G A C G T A C T G A G T C
A C G T A C G T A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CKGGCAGSSGCGGTGY
-GGGNGGGGGCGGGGC
 A T G C A C G T A C T G A C T G A T G C G T C A A C T G T A G C T A C G A C T G A G T C C T A G A C T G A C G T A C T G A G T C
A C G T T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CKGGCAGSSGCGGTGY
TNNGGGCAG---------
 A C G T A C G T A T G C A C G T A C T G A C T G A T G C G T C A A C T G T A G C T A C G A C T G A G T C C T A G A C T G A C G T A C T G A G T C
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CKGGCAGSSGCGGTGY-
-NNTNAGGGGCGGNNNN
 A T G C A C G T A C T G A C T G A T G C G T C A A C T G T A G C T A C G A C T G A G T C C T A G A C T G A C G T A C T G A G T C A C G T
A C G T A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CKGGCAGSSGCGGTGY--
-NNTNNGGGGCGGNGNGN
 A T G C A C G T A C T G A C T G A T G C G T C A A C T G T A G C T A C G A C T G A G T C C T A G A C T G A C G T A C T G A G T C A C G T A C G T
A C G T C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CKGGCAGSSGCGGTGY
-SDGCAGGTGCNS---
 A T G C A C G T A C T G A C T G A T G C G T C A A C T G T A G C T A C G A C T G A G T C C T A G A C T G A C G T A C T G A G T C
A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CKGGCAGSSGCGGTGY
--GACAGCTGCAG---
 A T G C A C G T A C T G A C T G A T G C G T C A A C T G T A G C T A C G A C T G A G T C C T A G A C T G A C G T A C T G A G T C
A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CKGGCAGSSGCGGTGY--
----AGGGGGCGGGGCTG
 A T G C A C G T A C T G A C T G A T G C G T C A A C T G T A G C T A C G A C T G A G T C C T A G A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G