Information for 6-TTCATTCTTVCARMMA (Motif 7)

A G C T G C A T A G T C G C T A A C G T A C G T A G T C A G C T C G A T T C G A G T A C G T C A C T G A G T A C T G C A C G T A
Reverse Opposite:
C G A T A C G T A C T G G A C T A C G T A C T G A G C T G C T A C T G A C T A G T C G A G T C A C G A T C T A G C G T A T C G A
p-value:1e-12
log p-value:-2.788e+01
Information Content per bp:1.623
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif69.0
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets56.3 +/- 21.4bp
Average Position of motif in Background53.7 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0070.1_Sox30_1/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTCATTCTTVCARMMA
ANNTCCATTGTTCNNN---
 A C G T A C G T A C G T A G C T G C A T A G T C G C T A A C G T A C G T A G T C A G C T C G A T T C G A G T A C G T C A C T G A G T A C T G C A C G T A
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T A C G T A C G T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TTCATTCTTVCARMMA
TTCAATTGTTCTAAAA-
 A C G T A G C T G C A T A G T C G C T A A C G T A C G T A G T C A G C T C G A T T C G A G T A C G T C A C T G A G T A C T G C A C G T A
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A A C G T

POL002.1_INR/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TTCATTCTTVCARMMA
-TCAGTCTT-------
 A G C T G C A T A G T C G C T A A C G T A C G T A G T C A G C T C G A T T C G A G T A C G T C A C T G A G T A C T G C A C G T A
A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TTCATTCTTVCARMMA
NNCATTCATTCATNNN----
 A C G T A C G T A C G T A C G T A G C T G C A T A G T C G C T A A C G T A C G T A G T C A G C T C G A T T C G A G T A C G T C A C T G A G T A C T G C A C G T A
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTCATTCTTVCARMMA
-CCATTGTTYB-----
 A G C T G C A T A G T C G C T A A C G T A C G T A G T C A G C T C G A T T C G A G T A C G T C A C T G A G T A C T G C A C G T A
A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TTCATTCTTVCARMMA
---ATTGTTA------
 A G C T G C A T A G T C G C T A A C G T A C G T A G T C A G C T C G A T T C G A G T A C G T C A C T G A G T A C T G C A C G T A
A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTCATTCTTVCARMMA
NCCATTGTTC------
 A G C T G C A T A G T C G C T A A C G T A C G T A G T C A G C T C G A T T C G A G T A C G T C A C T G A G T A C T G C A C G T A
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTCATTCTTVCARMMA
NCCATTGTTY------
 A G C T G C A T A G T C G C T A A C G T A C G T A G T C A G C T C G A T T C G A G T A C G T C A C T G A G T A C T G C A C G T A
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TTCATTCTTVCARMMA
CACATTCCAT------
 A G C T G C A T A G T C G C T A A C G T A C G T A G T C A G C T C G A T T C G A G T A C G T C A C T G A G T A C T G C A C G T A
G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TTCATTCTTVCARMMA
GACCACATTCATACAAT--
 A C G T A C G T A C G T A G C T G C A T A G T C G C T A A C G T A C G T A G T C A G C T C G A T T C G A G T A C G T C A C T G A G T A C T G C A C G T A
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T A C G T A C G T