Information for 13-ATAGTTAACT (Motif 47)

C G T A A C G T C G T A A C T G A C G T A C G T C G T A C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C G T C G T A C G T A A G T C A C G T C G T A A C G T
p-value:1e-3
log p-value:-7.644e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets10.0 +/- 0.8bp
Average Position of motif in Background79.1 +/- 14.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0081.1_Tcf1_1/Jaspar

Match Rank:1
Score:0.82
Offset:-3
Orientation:reverse strand
Alignment:---ATAGTTAACT----
NNNTTAGTTAACTNANN
 A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:2
Score:0.80
Offset:-4
Orientation:reverse strand
Alignment:----ATAGTTAACT---
ANNNCTAGTTAACNGNN
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

PH0167.1_Tcf1/Jaspar

Match Rank:3
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---ATAGTTAACT----
NTTTTAGTTAACNNAGN
 A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

HMBOX1/MA0895.1/Jaspar

Match Rank:4
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-ATAGTTAACT
ACTAGTTAAC-
 A C G T C G T A A C G T C G T A A C T G A C G T A C G T C G T A C G T A A G T C A C G T
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:5
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----ATAGTTAACT--
GAAAACTAGTTAACATC
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

PB0109.1_Bbx_2/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ATAGTTAACT-----
TGATTGTTAACAGTTGG
 A C G T A C G T C G T A A C G T C G T A A C T G A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

MYBL1/MA0776.1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:ATAGTTAACT--
ACCGTTAACGGT
 C G T A A C G T C G T A A C T G A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T
C T G A T G A C T A G C T C A G G A C T G C A T C G T A T C G A G T A C A T C G C A T G G A C T

Lhx3/MA0135.1/Jaspar

Match Rank:8
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--ATAGTTAACT-
GATTAATTAATTT
 A C G T A C G T C G T A A C G T C G T A A C T G A C G T A C G T C G T A C G T A A G T C A C G T A C G T
T C A G C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T

mix-a/MA0621.1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ATAGTTAACT
NCTAATTAANN
 A C G T C G T A A C G T C G T A A C T G A C G T A C G T C G T A C G T A A G T C A C G T
G T C A G A T C A C G T C G T A C G T A A C G T A C G T C G T A C T G A G A C T A C G T

PH0051.1_Hoxa4/Jaspar

Match Rank:10
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----ATAGTTAACT--
GATTATTAATTAACTTG
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T C G T A A C T G A C G T A C G T C G T A C G T A A G T C A C G T A C G T A C G T
C T A G C T G A G A C T G A C T T C G A G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G T C C A G T A G C T A C T G