Information for 17-GATCAGATTCCCA (Motif 40)

A C T G T G C A G C A T A T G C C G T A T A C G C T G A G A C T A G C T A G T C G A T C G A T C C G T A
Reverse Opposite:
C G A T C A T G C A T G A C T G T C G A C G T A G A C T A G T C G C A T A T C G C G T A A C G T G T A C
p-value:1e-7
log p-value:-1.727e+01
Information Content per bp:1.680
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif109.7
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets48.4 +/- 21.5bp
Average Position of motif in Background56.2 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GATCAGATTCCCA
GKVTCADRTTWC--
 A C G T A C T G T G C A G C A T A T G C C G T A T A C G C T G A G A C T A G C T A G T C G A T C G A T C C G T A
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GATCAGATTCCCA--
-----HTTTCCCASG
 A C T G T G C A G C A T A T G C C G T A T A C G C T G A G A C T A G C T A G T C G A T C G A T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GATCAGATTCCCA
GKMTCADRTTWC--
 A C G T A C T G T G C A G C A T A T G C C G T A T A C G C T G A G A C T A G C T A G T C G A T C G A T C C G T A
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GATCAGATTCCCA----
TACGAGACTCCTCTAAC
 A C T G T G C A G C A T A T G C C G T A T A C G C T G A G A C T A G C T A G T C G A T C G A T C C G T A A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:GATCAGATTCCCA----
-------TGCCCAGNHW
 A C T G T G C A G C A T A T G C C G T A T A C G C T G A G A C T A G C T A G T C G A T C G A T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

POL002.1_INR/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GATCAGATTCCCA
--TCAGTCTT---
 A C T G T G C A G C A T A T G C C G T A T A C G C T G A G A C T A G C T A G T C G A T C G A T C C G T A
A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GATCAGATTCCCA
---CACATTCCAT
 A C T G T G C A G C A T A T G C C G T A T A C G C T G A G A C T A G C T A G T C G A T C G A T C C G T A
A C G T A C G T A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GATCAGATTCCCA--
------ATGCCCACC
 A C T G T G C A G C A T A T G C C G T A T A C G C T G A G A C T A G C T A G T C G A T C G A T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

TEAD4/MA0809.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GATCAGATTCCCA
---CACATTCCAT
 A C T G T G C A G C A T A T G C C G T A T A C G C T G A G A C T A G C T A G T C G A T C G A T C C G T A
A C G T A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

MZF1/MA0056.1/Jaspar

Match Rank:10
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GATCAGATTCCCA
-------TCCCCA
 A C T G T G C A G C A T A T G C C G T A T A C G C T G A G A C T A G C T A G T C G A T C G A T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A