Information for 4-GGTCTACCCAGGAGGG (Motif 4)

A C T G A T C G C G A T A G T C C G A T C T G A G T A C A G T C A T G C G T C A A C T G A T C G G T C A A T C G A C T G A C T G
Reverse Opposite:
A G T C A G T C A T G C A C G T A T G C A G T C A C G T A T C G C T A G A C T G A G C T C G T A A C T G C G T A A T G C A G T C
p-value:1e-13
log p-value:-3.156e+01
Information Content per bp:1.891
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets63.2 +/- 16.3bp
Average Position of motif in Background51.0 +/- 10.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.64
Offset:6
Orientation:forward strand
Alignment:GGTCTACCCAGGAGGG--
------CACAGCAGGGGG
 A C T G A T C G C G A T A G T C C G A T C T G A G T A C A G T C A T G C G T C A A C T G A T C G G T C A A T C G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:GGTCTACCCAGGAGGG----
-----DCHCAGCAGGRGGCC
 A C T G A T C G C G A T A G T C C G A T C T G A G T A C A G T C A T G C G T C A A C T G A T C G G T C A A T C G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GGTCTACCCAGGAGGG--
---CCACACAGCAGGAGA
 A C T G A T C G C G A T A G T C C G A T C T G A G T A C A G T C A T G C G T C A A C T G A T C G G T C A A T C G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GGTCTACCCAGGAGGG--
---CCACACAGCAGGAGA
 A C T G A T C G C G A T A G T C C G A T C T G A G T A C A G T C A T G C G T C A A C T G A T C G G T C A A T C G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GGTCTACCCAGGAGGG
-----DCTCAGCAGG-
 A C T G A T C G C G A T A G T C C G A T C T G A G T A C A G T C A T G C G T C A A C T G A T C G G T C A A T C G A C T G A C T G
A C G T A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GGTCTACCCAGGAGGG--
---GAGCACAGCAGGACA
 A C T G A T C G C G A T A G T C C G A T C T G A G T A C A G T C A T G C G T C A A C T G A T C G G T C A A T C G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGTCTACCCAGGAGGG
GGACCACCCACG----
 A C T G A T C G C G A T A G T C C G A T C T G A G T A C A G T C A T G C G T C A A C T G A T C G G T C A A T C G A C T G A C T G
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GGTCTACCCAGGAGGG-
---CACCCCCGGGGGGG
 A C T G A T C G C G A T A G T C C G A T C T G A G T A C A G T C A T G C G T C A A C T G A T C G G T C A A T C G A C T G A C T G A C G T
A C G T A C G T A C G T A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GGTCTACCCAGGAGGG
----TGCCCAGNHW--
 A C T G A T C G C G A T A G T C C G A T C T G A G T A C A G T C A T G C G T C A A C T G A T C G G T C A A T C G A C T G A C T G
A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GGTCTACCCAGGAGGG-
--ACCCCCCCGGGGGGN
 A C T G A T C G C G A T A G T C C G A T C T G A G T A C A G T C A T G C G T C A A C T G A T C G G T C A A T C G A C T G A C T G A C G T
A C G T A C G T T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G