Information for 16-TTGGCCTSGAGGG (Motif 39)

A C G T A C G T T C A G T A C G A G T C A G T C G C A T T A G C T A C G C T G A C A T G A C T G T C A G
Reverse Opposite:
A G T C T G A C G T A C A G C T A T G C A T C G C G T A A C T G A C T G A T G C A G T C G T C A T G C A
p-value:1e-7
log p-value:-1.750e+01
Information Content per bp:1.685
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.11%
Number of Background Sequences with motif388.6
Percentage of Background Sequences with motif0.79%
Average Position of motif in Targets51.2 +/- 24.0bp
Average Position of motif in Background50.4 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TTGGCCTSGAGGG--
--TGCCCTNAGGGCA
 A C G T A C G T T C A G T A C G A G T C A G T C G C A T T A G C T A C G C T G A C A T G A C T G T C A G A C G T A C G T
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TTGGCCTSGAGGG--
--TGCCCTNAGGGCA
 A C G T A C G T T C A G T A C G A G T C A G T C G C A T T A G C T A C G C T G A C A T G A C T G T C A G A C G T A C G T
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TTGGCCTSGAGGG--
--TGCCCNNAGGGCA
 A C G T A C G T T C A G T A C G A G T C A G T C G C A T T A G C T A C G C T G A C A T G A C T G T C A G A C G T A C G T
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TTGGCCTSGAGGG
-AGGCCTAG----
 A C G T A C G T T C A G T A C G A G T C A G T C G C A T T A G C T A C G C T G A C A T G A C T G T C A G
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTGGCCTSGAGGG
-TGACCTTGAN--
 A C G T A C G T T C A G T A C G A G T C A G T C G C A T T A G C T A C G C T G A C A T G A C T G T C A G
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTGGCCTSGAGGG
-TGACCTTGAV--
 A C G T A C G T T C A G T A C G A G T C A G T C G C A T T A G C T A C G C T G A C A T G A C T G T C A G
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TTGGCCTSGAGGG-
--TGCCCNGGGGCA
 A C G T A C G T T C A G T A C G A G T C A G T C G C A T T A G C T A C G C T G A C A T G A C T G T C A G A C G T
A C G T A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TTGGCCTSGAGGG-------
-TGGCCACCAGGGGGCGCTA
 A C G T A C G T T C A G T A C G A G T C A G T C G C A T T A G C T A C G C T G A C A T G A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTGGCCTSGAGGG
BNTGDCCTTG----
 A C G T A C G T A C G T T C A G T A C G A G T C A G T C G C A T T A G C T A C G C T G A C A T G A C T G T C A G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TTGGCCTSGAGGG
-AGGCCTNG----
 A C G T A C G T T C A G T A C G A G T C A G T C G C A T T A G C T A C G C T G A C A T G A C T G T C A G
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T