Information for 8-TGAAACCAGA (Motif 38)

C G A T C T A G C G T A C T G A C T G A A G T C G A T C C G T A C A T G T G C A
Reverse Opposite:
A C G T G T A C A C G T C T A G T C A G A G C T A G C T G C A T G A T C G C T A
p-value:1e-7
log p-value:-1.753e+01
Information Content per bp:1.819
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.72%
Number of Background Sequences with motif300.9
Percentage of Background Sequences with motif0.61%
Average Position of motif in Targets55.0 +/- 23.2bp
Average Position of motif in Background50.1 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--TGAAACCAGA
ACTGAAACCA--
 A C G T A C G T C G A T C T A G C G T A C T G A C T G A A G T C G A T C C G T A C A T G T G C A
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TGAAACCAGA--
--AAACCACANN
 C G A T C T A G C G T A C T G A C T G A A G T C G A T C C G T A C A T G T G C A A C G T A C G T
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TGAAACCAGA---
-GWAAYHTGAKMC
 C G A T C T A G C G T A C T G A C T G A A G T C G A T C C G T A C A T G T G C A A C G T A C G T A C G T
A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TGAAACCAGA-
-NAAACCACAG
 C G A T C T A G C G T A C T G A C T G A A G T C G A T C C G T A C A T G T G C A A C G T
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:TGAAACCAGA--
--ATGCCAGACN
 C G A T C T A G C G T A C T G A C T G A A G T C G A T C C G T A C A T G T G C A A C G T A C G T
A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

PB0034.1_Irf4_1/Jaspar

Match Rank:6
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----TGAAACCAGA
CGTATCGAAACCAAA
 A C G T A C G T A C G T A C G T A C G T C G A T C T A G C G T A C T G A C T G A A G T C G A T C C G T A C A T G T G C A
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TGAAACCAGA---
--AAACCACAGAN
 C G A T C T A G C G T A C T G A C T G A A G T C G A T C C G T A C A T G T G C A A C G T A C G T A C G T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:TGAAACCAGA--
--AAACCACAGC
 C G A T C T A G C G T A C T G A C T G A A G T C G A T C C G T A C A T G T G C A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:9
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TGAAACCAGA---
-GWAAYHTGABMC
 C G A T C T A G C G T A C T G A C T G A A G T C G A T C C G T A C A T G T G C A A C G T A C G T A C G T
A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

PB0036.1_Irf6_1/Jaspar

Match Rank:10
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----TGAAACCAGA--
CTGATCGAAACCAAAGT
 A C G T A C G T A C G T A C G T A C G T C G A T C T A G C G T A C T G A C T G A A G T C G A T C C G T A C A T G T G C A A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T