Information for 15-CGAASCTGGGCAT (Motif 37)

A T G C T A C G C G T A T G C A T A G C G T A C A C G T T A C G A C T G A C T G A T G C T G C A C G A T
Reverse Opposite:
C G T A A C G T A T C G T G A C A G T C A G T C T G C A A C T G A T C G A C G T C G A T A G T C T A C G
p-value:1e-7
log p-value:-1.763e+01
Information Content per bp:1.718
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif28.2
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets43.9 +/- 25.3bp
Average Position of motif in Background53.9 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:CGAASCTGGGCAT
----NGTGGGCAT
 A T G C T A C G C G T A T G C A T A G C G T A C A C G T T A C G A C T G A C T G A T G C T G C A C G A T
A C G T A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CGAASCTGGGCAT
--WDNCTGGGCA-
 A T G C T A C G C G T A T G C A T A G C G T A C A C G T T A C G A C T G A C T G A T G C T G C A C G A T
A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CGAASCTGGGCAT----
-NNNNTTGGGCACNNCN
 A T G C T A C G C G T A T G C A T A G C G T A C A C G T T A C G A C T G A C T G A T G C T G C A C G A T A C G T A C G T A C G T A C G T
A C G T A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGAASCTGGGCAT
--AAYTAGGTCA-
 A T G C T A C G C G T A T G C A T A G C G T A C A C G T T A C G A C T G A C T G A T G C T G C A C G A T
A C G T A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:5
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:CGAASCTGGGCAT-
--------GTCATN
 A T G C T A C G C G T A T G C A T A G C G T A C A C G T T A C G A C T G A C T G A T G C T G C A C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CGAASCTGGGCAT
----GGTTGGCAT
 A T G C T A C G C G T A T G C A T A G C G T A C A C G T T A C G A C T G A C T G A T G C T G C A C G A T
A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CGAASCTGGGCAT---
CGCGCCGGGTCACGTA
 A T G C T A C G C G T A T G C A T A G C G T A C A C G T T A C G A C T G A C T G A T G C T G C A C G A T A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CGAASCTGGGCAT
--ATCAAGGTCA-
 A T G C T A C G C G T A T G C A T A G C G T A C A C G T T A C G A C T G A C T G A T G C T G C A C G A T
A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CGAASCTGGGCAT---
NGTAGGTTGGCATNNN
 A T G C T A C G C G T A T G C A T A G C G T A C A C G T T A C G A C T G A C T G A T G C T G C A C G A T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CGAASCTGGGCAT
------AGGTCA-
 A T G C T A C G C G T A T G C A T A G C G T A C A C G T T A C G A C T G A C T G A T G C T G C A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T