Information for 21-GAGGCCAACACTGGGG (Motif 36)

A C T G G C T A C T A G A C T G A G T C A T G C C G T A C T G A A G T C T C G A A G T C C G A T A C T G A C T G A C T G A T C G
Reverse Opposite:
A T G C A G T C G T A C G T A C C G T A A C T G A C G T A C T G A G C T A C G T A T C G A C T G A G T C A G T C C G A T A G T C
p-value:1e-8
log p-value:-1.871e+01
Information Content per bp:1.900
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.2 +/- 25.2bp
Average Position of motif in Background54.8 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GAGGCCAACACTGGGG
--TGCCAA--------
 A C T G G C T A C T A G A C T G A G T C A T G C C G T A C T G A A G T C T C G A A G T C C G A T A C T G A C T G A C T G A T C G
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GAGGCCAACACTGGGG
CGTGCCAAG-------
 A C T G G C T A C T A G A C T G A G T C A T G C C G T A C T G A A G T C T C G A A G T C C G A T A C T G A C T G A C T G A T C G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GAGGCCAACACTGGGG----
----CAATCACTGGCAGAAT
 A C T G G C T A C T A G A C T G A G T C A T G C C G T A C T G A A G T C T C G A A G T C C G A T A C T G A C T G A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GAGGCCAACACTGGGG
TRAGGTCA---------
 A C G T A C T G G C T A C T A G A C T G A G T C A T G C C G T A C T G A A G T C T C G A A G T C C G A T A C T G A C T G A C T G A T C G
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GAGGCCAACACTGGGG
-ATGCCAACC------
 A C T G G C T A C T A G A C T G A G T C A T G C C G T A C T G A A G T C T C G A A G T C C G A T A C T G A C T G A C T G A T C G
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:GAGGCCAACACTGGGG
-----GAACAATGGN-
 A C T G G C T A C T A G A C T G A G T C A T G C C G T A C T G A A G T C T C G A A G T C C G A T A C T G A C T G A C T G A T C G
A C G T A C G T A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-GAGGCCAACACTGGGG
AGRGGTCA---------
 A C G T A C T G G C T A C T A G A C T G A G T C A T G C C G T A C T G A A G T C T C G A A G T C C G A T A C T G A C T G A C T G A T C G
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GAGGCCAACACTGGGG
CTAGGCCT---------
 A C G T A C T G G C T A C T A G A C T G A G T C A T G C C G T A C T G A A G T C T C G A A G T C C G A T A C T G A C T G A C T G A T C G
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:GAGGCCAACACTGGGG
----VRAACAATGG--
 A C T G G C T A C T A G A C T G A G T C A T G C C G T A C T G A A G T C T C G A A G T C C G A T A C T G A C T G A C T G A T C G
A C G T A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GAGGCCAACACTGGGG
CAGGCCNNGGCCNN--
 A C T G G C T A C T A G A C T G A G T C A T G C C G T A C T G A A G T C T C G A A G T C C G A T A C T G A C T G A C T G A T C G
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T A C G T