Information for 7-CTCTWCTMAGAGA (Motif 23)

A G T C A C G T G T A C C G A T C G T A A G T C A C G T T G C A C G T A A C T G C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A G T C A C G T A C G T C G T A A C T G C G A T C G T A A C T G C G T A A C T G
p-value:1e-9
log p-value:-2.215e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.4 +/- 19.6bp
Average Position of motif in Background58.1 +/- 38.6bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTCTWCTMAGAGA-
--TTTCTNAGAAAN
 A G T C A C G T G T A C C G A T C G T A A G T C A C G T T G C A C G T A A C T G C G T A A C T G C G T A A C G T
A C G T A C G T A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:2
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CTCTWCTMAGAGA
-ATTTCCAAGAA-
 A G T C A C G T G T A C C G A T C G T A A G T C A C G T T G C A C G T A A C T G C G T A A C T G C G T A
A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CTCTWCTMAGAGA
CTATTTTTGG---
 A G T C A C G T G T A C C G A T C G T A A G T C A C G T T G C A C G T A A C T G C G T A A C T G C G T A
A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:4
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CTCTWCTMAGAGA
-TCTAAAAATAGA
 A G T C A C G T G T A C C G A T C G T A A G T C A C G T T G C A C G T A A C T G C G T A A C T G C G T A
A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

PB0129.1_Glis2_2/Jaspar

Match Rank:5
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CTCTWCTMAGAGA
TCTTTANTAATANN
 A C G T A G T C A C G T G T A C C G A T C G T A A G T C A C G T T G C A C G T A A C T G C G T A A C T G C G T A
A G C T A G T C C A G T G C A T C G A T C G T A C G A T G A C T G T C A C G T A G A C T T G C A G C A T C G A T

MEF2D/MA0773.1/Jaspar

Match Rank:6
Score:0.49
Offset:1
Orientation:forward strand
Alignment:CTCTWCTMAGAGA
-ACTATAAATAGA
 A G T C A C G T G T A C C G A T C G T A A G T C A C G T T G C A C G T A A C T G C G T A A C T G C G T A
A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

Stat4/MA0518.1/Jaspar

Match Rank:7
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CTCTWCTMAGAGA---
--TTTCCAGGAAATGG
 A G T C A C G T G T A C C G A T C G T A A G T C A C G T T G C A C G T A A C T G C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:8
Score:0.48
Offset:2
Orientation:forward strand
Alignment:CTCTWCTMAGAGA------
--CTACTTGGATACGGAAT
 A G T C A C G T G T A C C G A T C G T A A G T C A C G T T G C A C G T A A C T G C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:9
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:CTCTWCTMAGAGA---
----GGTTAGAGACCT
 A G T C A C G T G T A C C G A T C G T A A G T C A C G T T G C A C G T A A C T G C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:10
Score:0.48
Offset:5
Orientation:forward strand
Alignment:CTCTWCTMAGAGA
-----CTAATKGV
 A G T C A C G T G T A C C G A T C G T A A G T C A C G T T G C A C G T A A C T G C G T A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C