Information for 4-TAGACAACACTTT (Motif 20)

C A G T C G T A A C T G C G T A G T A C C G T A C G T A A G T C C G T A A T G C A G C T A C G T A C G T
Reverse Opposite:
C G T A C G T A C T G A A T C G A C G T A C T G A C G T A C G T A C T G A C G T A G T C A C G T G C T A
p-value:1e-9
log p-value:-2.215e+01
Information Content per bp:1.930
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.0 +/- 23.5bp
Average Position of motif in Background30.3 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TAGACAACACTTT---
NNGGCGACACCTCNNN
 C A G T C G T A A C T G C G T A G T A C C G T A C G T A A G T C C G T A A T G C A G C T A C G T A C G T A C G T A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

PB0042.1_Mafk_1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TAGACAACACTTT--
AAGTCAGCANTTTTN
 C A G T C G T A A C T G C G T A G T A C C G T A C G T A A G T C C G T A A T G C A G C T A C G T A C G T A C G T A C G T
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TAGACAACACTTT
BCAGACWA------
 A C G T C A G T C G T A A C T G C G T A G T A C C G T A C G T A A G T C C G T A A T G C A G C T A C G T A C G T
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TAGACAACACTTT
-AGATAASR----
 C A G T C G T A A C T G C G T A G T A C C G T A C G T A A G T C C G T A A T G C A G C T A C G T A C G T
A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A A C G T A C G T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TAGACAACACTTT-
NCTANGTCAGCAAATTT
 A C G T A C G T A C G T C A G T C G T A A C T G C G T A G T A C C G T A C G T A A G T C C G T A A T G C A G C T A C G T A C G T A C G T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

PB0067.1_Sox18_1/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TAGACAACACTTT--
NNTNANAACAATTNNA
 A C G T C A G T C G T A A C T G C G T A G T A C C G T A C G T A A G T C C G T A A T G C A G C T A C G T A C G T A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0062.1_Sox12_1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TAGACAACACTTT
NTTNAGAACAATTA
 A C G T C A G T C G T A A C T G C G T A G T A C C G T A C G T A A G T C C G T A A T G C A G C T A C G T A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

Foxj2/MA0614.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TAGACAACACTTT
GTAAACAA------
 A C G T C A G T C G T A A C T G C G T A G T A C C G T A C G T A A G T C C G T A A T G C A G C T A C G T A C G T
C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TAGACAACACTTT
GTAAACAA------
 A C G T C A G T C G T A A C T G C G T A G T A C C G T A C G T A A G T C C G T A A T G C A G C T A C G T A C G T
C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TAGACAACACTTT
-NGTCAGCANTTT
 C A G T C G T A A C T G C G T A G T A C C G T A C G T A A G T C C G T A A T G C A G C T A C G T A C G T
A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T