Information for 13-CTGGGCTGKSAGGSAG (Motif 17)

A G T C G C A T A C T G C T A G C T A G A T G C C G A T A T C G C A G T A T C G C G T A T A C G A C T G A T G C C G T A A C T G
Reverse Opposite:
A G T C G C A T A T C G G T A C A T G C C G A T A T G C G T C A A T G C C G T A T A C G G A T C G A T C T G A C C G T A A C T G
p-value:1e-9
log p-value:-2.296e+01
Information Content per bp:1.678
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif4.28%
Number of Background Sequences with motif545.7
Percentage of Background Sequences with motif1.11%
Average Position of motif in Targets50.9 +/- 27.9bp
Average Position of motif in Background50.6 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CTGGGCTGKSAGGSAG
---AGGTGNCAGACAG
 A G T C G C A T A C T G C T A G C T A G A T G C C G A T A T C G C A G T A T C G C G T A T A C G A C T G A T G C C G T A A C T G
A C G T A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:2
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CTGGGCTGKSAGGSAG
GGGGCTYGKCTGGGA-----
 A C G T A C G T A C G T A C G T A G T C G C A T A C T G C T A G C T A G A T G C C G A T A T C G C A G T A T C G C G T A T A C G A C T G A T G C C G T A A C T G
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CTGGGCTGKSAGGSAG
----VBTGWCAGCB--
 A G T C G C A T A C T G C T A G C T A G A T G C C G A T A T C G C A G T A T C G C G T A T A C G A C T G A T G C C G T A A C T G
A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CTGGGCTGKSAGGSAG
---AGGTGHCAGACA-
 A G T C G C A T A C T G C T A G C T A G A T G C C G A T A T C G C A G T A T C G C G T A T A C G A C T G A T G C C G T A A C T G
A C G T A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTGGGCTGKSAGGSAG
---GSCTGTCACTCA-
 A G T C G C A T A C T G C T A G C T A G A T G C C G A T A T C G C A G T A T C G C G T A T A C G A C T G A T G C C G T A A C T G
A C G T A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CTGGGCTGKSAGGSAG---
-----CTGGCAGNCTGCCA
 A G T C G C A T A C T G C T A G C T A G A T G C C G A T A T C G C A G T A T C G C G T A T A C G A C T G A T G C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTGGGCTGKSAGGSAG
---AGGTGTCA-----
 A G T C G C A T A C T G C T A G C T A G A T G C C G A T A T C G C A G T A T C G C G T A T A C G A C T G A T G C C G T A A C T G
A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTGGGCTGKSAGGSAG
---AGGTGTGA-----
 A G T C G C A T A C T G C T A G C T A G A T G C C G A T A T C G C A G T A T C G C G T A T A C G A C T G A T G C C G T A A C T G
A C G T A C G T A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CTGGGCTGKSAGGSAG
---AGGTGTGA-----
 A G T C G C A T A C T G C T A G C T A G A T G C C G A T A T C G C A G T A T C G C G T A T A C G A C T G A T G C C G T A A C T G
A C G T A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CTGGGCTGKSAGGSAG
----RHTGWCAR----
 A G T C G C A T A C T G C T A G C T A G A T G C C G A T A T C G C A G T A T C G C G T A T A C G A C T G A T G C C G T A A C T G
A C G T A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T